RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TRIB3Q96RU7 358 aa18.58■□□□□ 0.57
PRPF40B-208ENST00000548436 TMEM175Q9BSA9 504 aa18.58■□□□□ 0.57
PRPF40B-208ENST00000548436 GEMIN8Q9NWZ8 242 aaKnown RBP18.58■□□□□ 0.57
PRPF40B-208ENST00000548436 SERPINF2P08697 491 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 ARSAP15289 507 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 RGRP47804 291 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 FAM219BQ5XKK7 198 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 IL31Q6EBC2 164 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 FAM45BPQ6NSW5 357 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 FAM45AQ8TCE6 357 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 UCMAQ8WVF2 138 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 JADE3Q92613 823 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 PTERQ96BW5 349 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 MGME1Q9BQP7 344 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 MAGEH1Q9H213 219 aa18.58■□□□□ 0.56
PRPF40B-208ENST00000548436 RPP40O75818 363 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 FDXRP22570 491 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 MTA1Q13330 715 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 SETD3Q86TU7 594 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 CUZD1Q86UP6 607 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 DENND1CQ8IV53 801 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 GPR150Q8NGU9 434 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 CEP70Q8NHQ1 597 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 PEX13Q92968 403 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 PRICKLE1Q96MT3 831 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 GSTO2Q9H4Y5 243 aa18.57■□□□□ 0.56
PRPF40B-208ENST00000548436 PRSS56P0CW18 603 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SLC26A3P40879 764 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SGSHP51688 502 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 C1QTNF8P60827 252 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 KLC1Q07866 573 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 HERC3Q15034 1050 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 EML3Q32P44 896 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 C16orf89Q6UX73 402 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 IZUMO2Q6UXV1 221 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 DHDDSQ86SQ9 333 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SLC22A9Q8IVM8 553 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 PELI3Q8N2H9 469 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 MICAL1Q8TDZ2 1067 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 CAPNS2Q96L46 248 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 ZNF512Q96ME7 567 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SPON2Q9BUD6 331 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 MRPL9Q9BYD2 267 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 NACA2Q9H009 215 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 EML4Q9HC35 981 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 ANAPC1Q9H1A4 1944 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 UBFD1O14562 309 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 COCHO43405 550 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 NDST3O95803 873 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 KLKB1P03952 638 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 IMPDH1P20839 514 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 OR1D2P34982 312 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 CDH4P55283 916 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SATB1Q01826 763 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SLC8B1Q6J4K2 584 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 OR4L1Q8NH43 312 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SCLYQ96I15 445 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 EXOC2Q96KP1 924 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 CDK5RAP1Q96SZ6 601 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 MEAF6Q9HAF1 191 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 CATSPERZQ9NTU4 200 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 POLR3BQ9NW08 1133 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 ADAMTS6Q9UKP5 1117 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 PRPF19Q9UMS4 504 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 SPO11Q9Y5K1 396 aa18.56■□□□□ 0.56
PRPF40B-208ENST00000548436 ZNF840PA6NDX5 716 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 A6NHS1 94 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 HOXA2O43364 376 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 CD1DP15813 335 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 SLC11A2P49281 568 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 LAMB3Q13751 1172 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 MRNIPQ6NTE8 343 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 IRGCQ6NXR0 463 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 KBTBD6Q86V97 674 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 PSKH2Q96QS6 385 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 CDRT15Q96T59 188 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 VN1R3Q9BXE9 311 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 GKN1Q9NS71 199 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 MTRRQ9UBK8 725 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 UBA2Q9UBT2 640 aaPredicted RBP18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 STK39Q9UEW8 545 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 SEPT3Q9UH03 358 aa18.55■□□□□ 0.56
PRPF40B-208ENST00000548436 TCAF2A6NFQ2 919 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 KDELR3O43731 214 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 TSPAN8P19075 237 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 DPP6P42658 865 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 GALNT1Q10472 559 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 DEFB115Q30KQ5 88 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 ZNF678Q5SXM1 525 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 CHSY3Q70JA7 882 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 L3HYPDHQ96EM0 354 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 CDKN2AIPNLQ96HQ2 116 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 FAR2Q96K12 515 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 ECSITQ9BQ95 431 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 CINPQ9BW66 212 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 RIMKLBQ9ULI2 386 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 H3BNX3 289 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 SEC24AO95486 1093 aa18.54■□□□□ 0.56
PRPF40B-208ENST00000548436 EFEMP2O95967 443 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms