RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ERN2Q76MJ5 926 aaKnown RBP28.85■■■□□ 2.21
BRF1-213ENST00000548421 CACUL1Q86Y37 369 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 GSDMBQ8TAX9 411 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PEX13Q92968 403 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 MFSD3Q96ES6 412 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 ZNF778Q96MU6 729 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PCDH12Q9NPG4 1184 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 AURKAO14965 403 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 ABHD2P08910 425 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 NMBRP28336 390 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 SLC29A2Q14542 456 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 TSTD2Q5T7W7 516 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 ERAP2Q6P179 960 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 SYT13Q7L8C5 426 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 TMPRSS6Q8IU80 811 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 GPR63Q9BZJ6 419 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 ZFYVE1Q9HBF4 777 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 TREX1Q9NSU2 369 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 B4GALT6Q9UBX8 382 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 RIMKLBQ9ULI2 386 aa28.84■■■□□ 2.21
BRF1-213ENST00000548421 SCN8AQ9UQD0 1980 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 C1orf232A0A0U1RR37 186 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 CCDC78A2IDD5 438 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 C7P10643 843 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 ADRB3P13945 408 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 FAM193AP78312 1265 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 SIGLEC14Q08ET2 396 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 CASP8Q14790 479 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 TRIM67Q6ZTA4 783 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 LYSMD3Q7Z3D4 306 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 TTC30BQ8N4P2 665 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 STYXQ8WUJ0 223 aa28.83■■■□□ 2.21
BRF1-213ENST00000548421 FCRL3Q96P31 734 aaPredicted RBP28.83■■■□□ 2.21
BRF1-213ENST00000548421 SLC4A1P02730 911 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 DNTTP04053 509 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 LPOP22079 712 aaPredicted RBP28.82■■■□□ 2.2
BRF1-213ENST00000548421 VIPR1P32241 457 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 DRD3P35462 400 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 ZNF140P52738 457 aaPredicted RBP28.82■■■□□ 2.2
BRF1-213ENST00000548421 ZBTB16Q05516 673 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 CNTN1Q12860 1018 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 CDKN3Q16667 212 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 CRTC1Q6UUV9 634 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 AADATQ8N5Z0 425 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.82■■■□□ 2.2
BRF1-213ENST00000548421 RAB7BQ96AH8 199 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 UHRF1Q96T88 793 aaPredicted RBP28.82■■■□□ 2.2
BRF1-213ENST00000548421 POLMQ9NP87 494 aaPredicted RBP28.82■■■□□ 2.2
BRF1-213ENST00000548421 SCML1Q9UN30 329 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 KCTD3Q9Y597 815 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 FAM169AQ9Y6X4 670 aa28.82■■■□□ 2.2
BRF1-213ENST00000548421 BPTFQ12830 3046 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 A0A087WUV0 522 aaPredicted RBP28.81■■■□□ 2.2
BRF1-213ENST00000548421 ZCWPW2A0A1B0GU75 182 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 TCRBV21S2A2A0A5A6 115 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 PAMP19021 973 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 HMGCLP35914 325 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 MMP12P39900 470 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 P2RY2P41231 377 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 DGKEP52429 567 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 CCDC15Q0P6D6 951 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 ELP6Q0PNE2 266 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 GAS6Q14393 721 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 SKIDA1Q1XH10 827 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 ESRP1Q6NXG1 681 aaKnown RBP28.81■■■□□ 2.2
BRF1-213ENST00000548421 DPPA4Q7L190 304 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 HDXQ7Z353 690 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 TSPAN33Q86UF1 283 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 CLDN23Q96B33 292 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 FUT8Q9BYC5 575 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 POLR3BQ9NW08 1133 aaPredicted RBP28.81■■■□□ 2.2
BRF1-213ENST00000548421 SLC2A6Q9UGQ3 507 aa28.81■■■□□ 2.2
BRF1-213ENST00000548421 A0A0U1RQS6 177 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 TCRBV9S1A1TA0A576 114 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 A8MX80 341 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 PLK4O00444 970 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 CLDN7O95471 211 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 LHCGRP22888 699 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 STX2P32856 288 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 SEMG2Q02383 582 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 FRG1Q14331 258 aaKnown RBP28.8■■■□□ 2.2
BRF1-213ENST00000548421 CNGA3Q16281 694 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 PIP5KL1Q5T9C9 394 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 LRRC66Q68CR7 880 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 HDDC3Q8N4P3 179 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 FLCNQ8NFG4 579 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 OR13J1Q8NGT2 312 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 UHMK1Q8TAS1 419 aaKnown RBP28.8■■■□□ 2.2
BRF1-213ENST00000548421 EDAQ92838 391 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 SIPA1Q96FS4 1042 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 MRGPRX1Q96LB2 322 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 SLC6A17Q9H1V8 727 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 NCOR1O75376 2440 aa28.8■■■□□ 2.2
BRF1-213ENST00000548421 BUD23O43709 281 aaKnown RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 ALDH1A2O94788 518 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 NUDT17P0C025 328 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 ZNF30P17039 623 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 RPS9P46781 194 aaKnown RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 ACVR1Q04771 509 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 ARHGEF7Q14155 803 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms