RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CERCAMQ5T4B2 595 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 LIPIQ6XZB0 460 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 ATG14Q6ZNE5 492 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 ARHGAP36Q6ZRI8 547 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 PIM3Q86V86 326 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 UMODL1-AS1Q8N2C9 162 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 ENOX1Q8TC92 643 aaKnown RBP12□□□□□ -0.49
TRAFD1-205ENST00000548277 HCAR2Q8TDS4 363 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 PATE1Q8WXA2 126 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 HTR3CQ8WXA8 447 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 ZNF641Q96N77 438 aaPredicted RBP12□□□□□ -0.49
TRAFD1-205ENST00000548277 STARD5Q9NSY2 213 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 GOLGA6AQ9NYA3 693 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 DGKBQ9Y6T7 804 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 TRBV23OR9-2A0A075B6M9 112 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 TSPAN11A1L157 253 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 ANKRD62A6NC57 917 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 RHPN2P1A8MT19 583 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 WASH4PA8MWX3 477 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 DFFAO00273 331 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 DAPK3O43293 454 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 CALB1P05937 261 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 AK4P27144 223 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 SERPINA4P29622 427 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 SCNN1BP51168 640 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 B4GALNT1Q00973 533 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 BIRC2Q13490 618 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 HLTFQ14527 1009 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 GRM3Q14832 879 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 CLEC16AQ2KHT3 1053 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 NKAIN2Q5VXU1 208 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 PNCKQ6P2M8 343 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 DNAJC24Q6P3W2 148 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 DCUN1D2Q6PH85 259 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 BRAT1Q6PJG6 821 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 TRIM72Q6ZMU5 477 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 ZNF574Q6ZN55 896 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 ZDHHC1Q8WTX9 485 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 PDCD6IPQ8WUM4 868 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 NSMCE3Q96MG7 304 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 NUDT22Q9BRQ3 303 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 CINPQ9BW66 212 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 LRRC19Q9H756 370 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 ATP13A3Q9H7F0 1226 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 CARS2Q9HA77 564 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 SP110Q9HB58 689 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 PCSK1NQ9UHG2 260 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 CFAP46Q8IYW2 2715 aa11.99□□□□□ -0.49
TRAFD1-205ENST00000548277 PRSS38A1L453 326 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 ARHGAP42A6NI28 874 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 TMCO5BA8MYB1 307 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 EEF2KO00418 725 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 SUV39H1O43463 412 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PRAMEF11O60813 436 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 ECEL1O95672 775 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 FUCA1P04066 466 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 ITGB2P05107 769 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 FGF1P05230 155 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PNLIPP16233 465 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 GM2AP17900 193 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 KELP23276 732 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 GNPDA1P46926 289 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 ZNF143P52747 638 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 JAM2P57087 298 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 KIAA1024LP59773 190 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 OGDHQ02218 1023 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PTPRRQ15256 657 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 KRT31Q15323 416 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 CA9Q16790 459 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 COLEC12Q5KU26 742 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 FKBP15Q5T1M5 1219 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 TMEM164Q5U3C3 297 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 CDKAL1Q5VV42 579 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 SLC30A9Q6PML9 568 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PHF13Q86YI8 300 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 SLITRK4Q8IW52 837 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 C3orf20Q8ND61 904 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PTCD2Q8WV60 388 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PMEPA1Q969W9 287 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 TUBGCP5Q96RT8 1024 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 FANCLQ9NW38 375 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 AKAP7Q9P0M2 348 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 ACSL6Q9UKU0 697 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 PLEKHM1Q9Y4G2 1056 aa11.98□□□□□ -0.49
TRAFD1-205ENST00000548277 A0A0U1RQS6 177 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 A0A1W2PQC6 194 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 FGF10O15520 208 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 NUDT21O43809 227 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 CPNE6O95741 557 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 TPM2P07951 284 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 FGF3P11487 239 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 CCNB1P14635 433 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 POLD2P49005 469 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 NDST2P52849 883 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 POLR2LP62875 67 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 AGERQ15109 404 aa11.97□□□□□ -0.49
TRAFD1-205ENST00000548277 DOK6Q6PKX4 331 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms