RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FBXO10Q9UK96 956 aa13.48□□□□□ -0.25
PTCH1-215ENST00000547672 APPL1Q9UKG1 709 aa13.48□□□□□ -0.25
PTCH1-215ENST00000547672 SLC27A6Q9Y2P4 619 aa13.48□□□□□ -0.25
PTCH1-215ENST00000547672 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
PTCH1-215ENST00000547672 BRCA2P51587 3418 aa13.48□□□□□ -0.25
PTCH1-215ENST00000547672 CCDC78A2IDD5 438 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 WDR91A4D1P6 747 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 SCAMP3O14828 347 aaKnown RBP13.47□□□□□ -0.25
PTCH1-215ENST00000547672 NDUFS3O75489 264 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 PRAMEF12O95522 483 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 S1PR4O95977 384 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 MT-CO1P00395 513 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 RBP1P09455 135 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 ADH5P11766 374 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 SRCP12931 536 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 HLA-FP30511 346 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 BMP8BP34820 402 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 HMGCLP35914 325 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 ZNF140P52738 457 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-215ENST00000547672 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
PTCH1-215ENST00000547672 TMPRSS15P98073 1019 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 KCNC3Q14003 757 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 IHHQ14623 411 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 SETDB1Q15047 1291 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 DHCR24Q15392 516 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 ATAT1Q5SQI0 421 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 USP45Q70EL2 814 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 ADGRD2Q7Z7M1 963 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 CRLF3Q8IUI8 442 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 KIRREL3Q8IZU9 778 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 OR4K2Q8NGD2 314 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 WFDC5Q8TCV5 224 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 TBATAQ96M53 351 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 ZSWIM3Q96MP5 696 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 GDF15Q99988 308 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 OSBPL1AQ9BXW6 950 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 LINC00597Q9H2U6 94 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 KDM4CQ9H3R0 1056 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 SYTL2Q9HCH5 934 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 RAD18Q9NS91 495 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 IL1RAPL1Q9NZN1 696 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 HECAQ9UBI9 543 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-215ENST00000547672 EVLQ9UI08 416 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-215ENST00000547672 PLA2G4CQ9UP65 541 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 ARL5AQ9Y689 179 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 SLC30A1Q9Y6M5 507 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 USH1CQ9Y6N9 552 aa13.47□□□□□ -0.25
PTCH1-215ENST00000547672 CCDC162PA2VCL2 907 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 WASH3PC4AMC7 463 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 GOLGA8TH3BQL2 631 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 DCTN3O75935 186 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 HAUS5O94927 633 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 KLHL2O95198 593 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 GOT2P00505 430 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 PROCP04070 461 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 PYGLP06737 847 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 CD9P21926 228 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 SKIV2L2P42285 1042 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ABL2P42684 1182 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 DGKGP49619 791 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 HK2P52789 917 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 TRAF2Q12933 501 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 CBX2Q14781 532 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 EIF4HQ15056 248 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 DLG2Q15700 870 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 RARS2Q5T160 578 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ATXN7L2Q5T6C5 722 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 MBLAC2Q68D91 279 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 GRAMD4Q6IC98 578 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 UGT3A1Q6NUS8 523 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 BRAT1Q6PJG6 821 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 CLEC14AQ86T13 490 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 DENND6AQ8IWF6 608 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 CBARPQ8N350 705 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ITFG1Q8TB96 612 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 PIH1D2Q8WWB5 315 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ING5Q8WYH8 240 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ATXN7L3BQ96GX2 97 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ASB16Q96NS5 453 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 MRPL57Q9BQC6 102 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 TM6SF2Q9BZW4 377 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ZFP14Q9HCL3 533 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 INTS6Q9UL03 887 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 CDH7Q9ULB5 785 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ERVW-1Q9UQF0 538 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 RUVBL2Q9Y230 463 aaKnown RBP13.46□□□□□ -0.25
PTCH1-215ENST00000547672 PPIL1Q9Y3C6 166 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
PTCH1-215ENST00000547672 A0A0J9YYE9 177 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 CCT8L1PA6NM43 557 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-215ENST00000547672 F8W8V4 182 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 H3BMM5 538 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 SMAD6O43541 496 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms