RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 PEX13Q92968 403 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 ZBTB9Q96C00 473 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 CERS2Q96G23 380 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 SHDQ96IW2 340 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 PKNOX2Q96KN3 472 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 ZNF778Q96MU6 729 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 KLHL32Q96NJ5 620 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 SH3GL2Q99962 352 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 TRABDQ9H4I3 376 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 MAGEE1Q9HCI5 957 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 ZDHHC4Q9NPG8 344 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 TREX1Q9NSU2 369 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 RIMKLBQ9ULI2 386 aa16.95■□□□□ 0.3
ARFGAP1-220ENST00000547204 ANTXRLA6NF34 631 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 CAPN8A6NHC0 703 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 FAM159BA6NKW6 160 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 C1QAP02745 245 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 EPHX1P07099 455 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 MYZAPP0CAP1 466 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 CTPS1P17812 591 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 TIE1P35590 1138 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 ABL2P42684 1182 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 POLR2LP62875 67 aaKnown RBP16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 MGAT5Q09328 741 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 EFTUD2Q15029 972 aaKnown RBP eCLIP16.94■□□□□ 0.36e-7■■■■□ 23.5
ARFGAP1-220ENST00000547204 SLC44A4Q53GD3 710 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 ZNF805Q5CZA5 627 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 ESRP1Q6NXG1 681 aaKnown RBP16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 DSG4Q86SJ6 1040 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 TMIEQ8NEW7 156 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 HCAR2Q8TDS4 363 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 CDKL2Q92772 493 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 SMIM14Q96QK8 99 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 PPANQ9NQ55 473 aaKnown RBP16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 VPS18Q9P253 973 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 DKK3Q9UBP4 350 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 SLC2A6Q9UGQ3 507 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 SLC24A2Q9UI40 661 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 PPIL1Q9Y3C6 166 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 ZNF711Q9Y462 761 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 ARL5AQ9Y689 179 aa16.94■□□□□ 0.3
ARFGAP1-220ENST00000547204 SMIM23A6NLE4 172 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 C2orf81A6NN90 581 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 POC1B-GALNT4F8VUJ3 575 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 DCNP07585 359 aaKnown RBP16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 ALPIP09923 528 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 CHRM1P11229 460 aaPredicted RBP16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 SLCO1A2P46721 670 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 ZNF140P52738 457 aaPredicted RBP16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 STARD6P59095 220 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 PDE1BQ01064 536 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 NAB1Q13506 487 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 ANGPT1Q15389 498 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 MLF2Q15773 248 aaPredicted RBP16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 HSP90B2PQ58FF3 399 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 PDPK2PQ6A1A2 396 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 TPRG1Q6ZUI0 275 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 USP45Q70EL2 814 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 TRMT11Q7Z4G4 463 aaKnown RBP16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 TDRPQ86YL5 185 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 UNC5BQ8IZJ1 945 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 MDGA1Q8NFP4 955 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 PJA1Q8NG27 643 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 FAM3CQ92520 227 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 FOXQ1Q9C009 403 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 PRSS16Q9NQE7 514 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 SMYD2Q9NRG4 433 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 C20orf96Q9NUD7 363 aaPredicted RBP16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 PPM1HQ9ULR3 514 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 KCTD3Q9Y597 815 aa16.93■□□□□ 0.3
ARFGAP1-220ENST00000547204 TLDC2A0PJX2 215 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 MAN2B1O00754 1011 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 AURKAO14965 403 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 CDH16O75309 829 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 LPOP22079 712 aaPredicted RBP16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 NFKBIAP25963 317 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 GCAP28676 217 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 HNF1BP35680 557 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 WASP42768 502 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 MSH2P43246 934 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 PRKCQQ04759 706 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 ACVR1Q04771 509 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 CNGA3Q16281 694 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 SKIDA1Q1XH10 827 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 SDE2Q6IQ49 451 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 KCNMB4Q86W47 210 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 LRRC6Q86X45 466 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 CTAGE3PQ8IX95 158 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 RIBC1Q8N443 379 aaPredicted RBP16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 TTC30BQ8N4P2 665 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 PPM1NQ8N819 430 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 OR13J1Q8NGT2 312 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 PIP4K2CQ8TBX8 421 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 STYXQ8WUJ0 223 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 SCRN2Q96FV2 425 aa16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 DNAJC1Q96KC8 554 aaKnown RBP16.92■□□□□ 0.3
ARFGAP1-220ENST00000547204 MCCC1Q96RQ3 725 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms