RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PDPRQ8NCN5 879 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 C2CD4AQ8NCU7 369 aaPredicted RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 OR13F1Q8NGS4 319 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 MAGEE2Q8TD90 523 aaPredicted RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 USP33Q8TEY7 942 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 EVPLQ92817 2033 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 MPHOSPH6Q99547 160 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 TDRD1Q9BXT4 1180 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 SNTG2Q9NY99 539 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 MAP10Q9P2G4 905 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 IFT80Q9P2H3 777 aaPredicted RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 B3GNT3Q9Y2A9 372 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 DYTNA2CJ06 578 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 PAMP19021 973 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 EEF1B2P24534 225 aaKnown RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 ARNTP27540 789 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 HOXD12P35452 270 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 ARCN1P48444 511 aaKnown RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 AIF1P55008 147 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 TNK2Q07912 1038 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 SEMA3BQ13214 749 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 ITGADQ13349 1161 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 CAPRIN1Q14444 709 aaKnown RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 PLCL1Q15111 1095 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 FAM219BQ5XKK7 198 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 LBX2Q6XYB7 198 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 SLC22A9Q8IVM8 553 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 MINDY1Q8N5J2 469 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 SPATA22Q8NHS9 363 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 SLC9A7Q96T83 725 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 GSTO2Q9H4Y5 243 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 SOX17Q9H6I2 414 aaPredicted RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 FANCEQ9HB96 536 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 AAR2Q9Y312 384 aaKnown RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 TRIM17Q9Y577 477 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 HTR3EA5X5Y0 456 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 INPP4BO15327 924 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 DYNC1LI2O43237 492 aaPredicted RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 RBP1P09455 135 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 LTA4HP09960 611 aaKnown RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 RFC2P35250 354 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 NDUFV1P49821 464 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 VPS26BQ4G0F5 336 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 ZNF484Q5JVG2 852 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 RBM20Q5T481 1227 aaKnown RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 C9orf57Q5W0N0 161 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 ZNF773Q6PK81 442 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 HFE2Q6ZVN8 426 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 IPMKQ8NFU5 416 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 NTAN1Q96AB6 310 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 NRBF2Q96F24 287 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 SLC2A13Q96QE2 648 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 PLEKHA5Q9HAU0 1116 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 RIC8BQ9NVN3 520 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 CMTM6Q9NX76 183 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.24□□□□□ -0.13
SRP54-202ENST00000546080 SLC2A6Q9UGQ3 507 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 FBXO5Q9UKT4 447 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 PLXNA1Q9UIW2 1896 aa14.24□□□□□ -0.13
SRP54-202ENST00000546080 UBFD1O14562 309 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 CLPXO76031 633 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 SUPT7LO94864 414 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 SNAP29O95721 258 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 MYL3P08590 195 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 TSPAN8P19075 237 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 HCAR3P49019 387 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 EIF2B2P49770 351 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 ZNF280AP59817 542 aaPredicted RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 SEPT6Q14141 434 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 CYP2A13Q16696 494 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 TRIM16LQ309B1 348 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 DCAF4L1Q3SXM0 396 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 ZNF618Q5T7W0 954 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 CYHR1Q6ZMK1 362 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 GADL1Q6ZQY3 521 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 FAM35AQ86V20 835 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 FBXO16Q8IX29 292 aaPredicted RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 C3orf30Q96M34 536 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 TRMOQ9BU70 441 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 FICDQ9BVA6 458 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 AKTIPQ9H8T0 292 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 INTS10Q9NVR2 710 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 KPNA4O00629 521 aaPredicted RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 MT-CYBP00156 380 aaPredicted RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 MTHFD1P11586 935 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 CAPN3P20807 821 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 JAK1P23458 1154 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 POLR2IP36954 125 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 SCAPQ12770 1279 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 FBXO47Q5MNV8 452 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 TMEM53Q6P2H8 277 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 USP51Q70EK9 711 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 SAMD7Q7Z3H4 446 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 IGFN1Q86VF2 1251 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 SPNS2Q8IVW8 549 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms