RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 DUOXA1Q1HG43 343 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 NAPEPLDQ6IQ20 393 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 PRUNE1Q86TP1 453 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 TSPAN33Q86UF1 283 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 CBARPQ8N350 705 aaPredicted RBP20.54■□□□□ 0.88
HMGA2-211ENST00000545998 CCDC89Q8N998 374 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 LENG8Q96PV6 779 aaPredicted RBP20.54■□□□□ 0.88
HMGA2-211ENST00000545998 HINFPQ9BQA5 517 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 PARD6AQ9NPB6 346 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 FZD3Q9NPG1 666 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 COQ6Q9Y2Z9 468 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 BPTFQ12830 3046 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 GOLGA6L10A0A0M3HER8 536 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 PRR5-ARHGAP8B1AHC4 643 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 PATE3B3GLJ2 98 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 PRAMEF26H0Y7S4 382 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 PHF2O75151 1096 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 ATXN1LP0C7T5 689 aaKnown RBP20.53■□□□□ 0.88
HMGA2-211ENST00000545998 ZNF806P0C7X5 589 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 GM2AP17900 193 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 HNRNPA2B1P22626 353 aaKnown RBP20.53■□□□□ 0.88
HMGA2-211ENST00000545998 COILP38432 576 aaPredicted RBP20.53■□□□□ 0.88
HMGA2-211ENST00000545998 AFF3P51826 1226 aaKnown RBP20.53■□□□□ 0.88
HMGA2-211ENST00000545998 AGERQ15109 404 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 SLC23A3Q6PIS1 610 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 CRTC1Q6UUV9 634 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 GSTA5Q7RTV2 222 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 TMEM145Q8NBT3 493 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 ATL2Q8NHH9 583 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 KLF6Q99612 283 aaPredicted RBP20.53■□□□□ 0.88
HMGA2-211ENST00000545998 RNF14Q9UBS8 474 aa20.53■□□□□ 0.88
HMGA2-211ENST00000545998 TP53BP1Q12888 1972 aaPredicted RBP20.53■□□□□ 0.88
HMGA2-211ENST00000545998 ADAMTS9Q9P2N4 1935 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 PCDH15Q96QU1 1955 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 A0A0U1RQS6 177 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 RAD51BO15315 384 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 ZSCAN5DPP0CG00 497 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 AKT2P31751 481 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 ADRA1AP35348 466 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 ACTN2P35609 894 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 SLC1A5Q15758 541 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 CDKN3Q16667 212 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 SIRPB2Q5JXA9 342 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 FAXCQ5TGI0 409 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 KCTD11Q693B1 232 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 FSD1LQ9BXM9 530 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 CAPN10Q9HC96 672 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 SEMA4GQ9NTN9 838 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 PAK5Q9P286 719 aa20.52■□□□□ 0.88
HMGA2-211ENST00000545998 A0A1W2PR77 199 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 PSMD11O00231 422 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 AGTP01019 485 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 RPL22P35268 128 aaKnown RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CHRNA4P43681 627 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 FNTAP49354 379 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 LMNB2Q03252 620 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 PTSQ03393 145 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 ARHGEF7Q14155 803 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CSRP2Q16527 193 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 TRIM61Q5EBN2 209 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 LRRC66Q68CR7 880 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CCDC70Q6NSX1 233 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CCDC137Q6PK04 289 aaKnown RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 RANBP10Q6VN20 620 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 DENND6BQ8NEG7 585 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CENPTQ96BT3 561 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 COQ10AQ96MF6 247 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 MYOCQ99972 504 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 FICDQ9BVA6 458 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 AASDHPPTQ9NRN7 309 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CA5BQ9Y2D0 317 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 GOLGA6CA6NDK9 693 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 GOLGA6BA6NDN3 693 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 PDE2AO00408 941 aaPredicted RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 KHNYNO15037 678 aaKnown RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 LZTS3O60299 673 aaPredicted RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CFIP05156 583 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 GOLGA6DP0CG33 693 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 ZNF30P17039 623 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 HLA-DPA1P20036 260 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 FDFT1P37268 417 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 TNNT3P45378 269 aaPredicted RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 CSNK1EP49674 416 aaKnown RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 OLIG2Q13516 323 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 TCEAL6Q6IPX3 200 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 C4orf22Q6V702 233 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 TAB3Q8N5C8 712 aaPredicted RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 SLC25A41Q8N5S1 370 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 TP53I13Q8NBR0 393 aaPredicted RBP20.51■□□□□ 0.87
HMGA2-211ENST00000545998 TCEAL3Q969E4 200 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 C1QTNF7Q9BXJ2 289 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 ETNK1Q9HBU6 452 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 MAGEE1Q9HCI5 957 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 GOLGA6AQ9NYA3 693 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 SLC6A14Q9UN76 642 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 HS3ST3A1Q9Y663 406 aa20.51■□□□□ 0.87
HMGA2-211ENST00000545998 RECQL5O94762 991 aaPredicted RBP20.5■□□□□ 0.87
HMGA2-211ENST00000545998 CLDN7O95471 211 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 AP2A1O95782 977 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 WNT1P04628 370 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms