RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RNF8O76064 485 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 FTLP02792 175 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 WNT1P04628 370 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 TPM3P06753 285 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 GRK6P43250 576 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 NEK3P51956 506 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF135P52742 658 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 SNRPD1P62314 119 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ZBED6P86452 979 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 CLCQ05315 142 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 TRIP6Q15654 476 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 TDRD12Q587J7 1177 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 CARD16Q5EG05 197 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 KCNT1Q5JUK3 1230 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ZBTB37Q5TC79 503 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 KIAA1161Q6NSJ0 714 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 CCDC81Q6ZN84 652 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ERN2Q76MJ5 926 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 PSTKQ8IV42 348 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 UMODL1-AS1Q8N2C9 162 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 PYROXD2Q8N2H3 581 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 OXR1Q8N573 874 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 MFSD2AQ8NA29 543 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 TMEM145Q8NBT3 493 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 OR2AP1Q8NGE2 309 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 UTP4Q969X6 686 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ARRDC3Q96B67 414 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 GDAP1L1Q96MZ0 367 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ELF4Q99607 663 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 CDC6Q99741 560 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 HEPHQ9BQS7 1158 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 SNRNP25Q9BV90 132 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 OSBPL1AQ9BXW6 950 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 MAGEB5Q9BZ81 275 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 TM6SF2Q9BZW4 377 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ISCUQ9H1K1 167 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 NOL6Q9H6R4 1146 aaKnown RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ZDHHC6Q9H6R6 413 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ERVMER34-1Q9H9K5 563 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 GDF3Q9NR23 364 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ARHGAP20Q9P2F6 1191 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 CAPN11Q9UMQ6 739 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 IGF2RP11717 2491 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ACACAQ13085 2346 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 ARHGEF17Q96PE2 2063 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-223ENST00000545440 A0A1W2PQU0 124 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 RASA4BC9J798 803 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 H0Y8X5 98 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 TLR4O00206 839 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 RNF103O00237 685 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 EEF2KO00418 725 aaKnown RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 RASA4O43374 803 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 BUB1O43683 1085 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 AP1G1O43747 822 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 PRPSAP2O60256 369 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 LRCH4O75427 683 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 TMCC1O94876 653 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ALX3O95076 343 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 TIAF1O95411 115 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 IGSF6O95976 241 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 GYPCP04921 128 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 SERPING1P05155 500 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 FTH1P19P0C7X4 201 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 SKILP12757 684 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ADRB3P13945 408 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 DRD2P14416 443 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 RAB6AP20340 208 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 EPHA8P29322 1005 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 MIPP30301 263 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 MAT2AP31153 395 aaKnown RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 PCK1P35558 622 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ARRB1P49407 418 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 DNA2P51530 1060 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 NDST2P52849 883 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 NXPH1P58417 271 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 FAM193AP78312 1265 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 SERINC3Q13530 473 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ACAP1Q15027 740 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF284Q2VY69 593 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 INO80DQ53TQ3 878 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF805Q5CZA5 627 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ERMARDQ5T6L9 678 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 RFX8Q6ZV50 586 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 CYP4V2Q6ZWL3 525 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 PARS2Q7L3T8 475 aaKnown RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 HORMAD1Q86X24 394 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF354CQ86Y25 554 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ARFGAP1Q8N6T3 406 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 SETD7Q8WTS6 366 aaKnown RBP7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ADAMTS14Q8WXS8 1223 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 RAB7BQ96AH8 199 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 ARHGEF26Q96DR7 871 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 HMCESQ96FZ2 354 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 CAMK1GQ96NX5 476 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 PEBP4Q96S96 227 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 TM9SF2Q99805 663 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 TRIM7Q9C029 511 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 KCNF1Q9H3M0 494 aa7.78□□□□□ -1.16
SNHG1-223ENST00000545440 DHX35Q9H5Z1 703 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms