RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 MARCH2Q9P0N8 246 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 PFDN6O15212 129 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 TNFAIP8O95379 198 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 MATN4O95460 622 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 CRTAMO95727 393 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 JUNP05412 331 aaKnown RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 SERPINF2P08697 491 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 HAPLN1P10915 354 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ENO3P13929 434 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF37AP17032 561 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 STC1P52823 247 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PSME3P61289 254 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ATP6V0D1P61421 351 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 FOLH1Q04609 750 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 CRHR2Q13324 411 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PCSK7Q16549 785 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 TMEM198Q66K66 360 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 KLHDC10Q6PID8 442 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 UGT2A3Q6UWM9 527 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 LARP4Q71RC2 724 aaKnown RBP eCLIP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF483Q8TF39 744 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 FBXO32Q969P5 355 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 HDAC10Q969S8 669 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PSMG2Q969U7 264 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.48□□□□□ -0.412e-8■■■■■ 39.2
PAAF1-215ENST00000544909 DCUN1D1Q96GG9 259 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 HOPXQ9BPY8 73 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 MGME1Q9BQP7 344 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 TTLL2Q9BWV7 592 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF696Q9H7X3 374 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PDFQ9HBH1 243 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 TMEM161AQ9NX61 479 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 GMIPQ9P107 970 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PCDHGA7Q9Y5G6 932 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 CHD5Q8TDI0 1954 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 CCDC78A2IDD5 438 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 SYCE1LA8MT33 242 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 J3KR12 359 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 STAMBPO95630 424 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 NDST3O95803 873 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 UBTFL6P0CB48 400 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 TM4SF4P48230 202 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PGFP49763 221 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 CCNHP51946 323 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 DSC2Q02487 901 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 GPR17Q13304 367 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF235Q14590 738 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PABPC1LQ4VXU2 614 aaKnown RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 OGFOD2Q6N063 350 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 RNF180Q86T96 592 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 BHLHE22Q8NFJ8 381 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-215ENST00000544909 OR6P1Q8NGX9 317 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 C19orf60Q96EN9 201 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 PSKH2Q96QS6 385 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 SPATA16Q9BXB7 569 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 DERL2Q9GZP9 239 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 SEPT3Q9UH03 358 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 NDUFAF1Q9Y375 327 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 COMMD10Q9Y6G5 202 aa12.48□□□□□ -0.41
PAAF1-215ENST00000544909 C15orf38-AP3S2A0A0A6YYH1 394 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 TCRBV3S1A0A5B6 114 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 H7C4K7 107 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 AURKAO14965 403 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 CD3EAPO15446 510 aaKnown RBP12.47□□□□□ -0.41
PAAF1-215ENST00000544909 NRP2O60462 931 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 KERAO60938 352 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 CD1DP15813 335 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 FGFR3P22607 806 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 ETFBP38117 255 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 CCR10P46092 362 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
PAAF1-215ENST00000544909 ITKQ08881 620 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 PEX6Q13608 980 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 ALFQ53S48 1182 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 RNF220Q5VTB9 566 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 REP15Q6BDI9 236 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 AFTPHQ6ULP2 937 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 ARPINQ7Z6K5 226 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 TFAP2DQ7Z6R9 452 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 PDZD8Q8NEN9 1154 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 SHKBP1Q8TBC3 707 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 PBXIP1Q96AQ6 731 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 RPRD1AQ96P16 312 aaPredicted RBP12.47□□□□□ -0.41
PAAF1-215ENST00000544909 FAM193BQ96PV7 902 aaPredicted RBP12.47□□□□□ -0.41
PAAF1-215ENST00000544909 TRIB3Q96RU7 358 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 NDNQ99608 321 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 LBHD1Q9BQE6 289 aaPredicted RBP12.47□□□□□ -0.41
PAAF1-215ENST00000544909 NUSAP1Q9BXS6 441 aaKnown RBP12.47□□□□□ -0.41
PAAF1-215ENST00000544909 TRIM15Q9C019 465 aa12.47□□□□□ -0.41
PAAF1-215ENST00000544909 ATXN3LQ9H3M9 355 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms