RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MMP17Q9ULZ9 603 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 CCL26Q9Y258 94 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ZFYVE26Q68DK2 2539 aa6.4□□□□□ -1.39
CPSF7-222ENST00000544585 URB1O60287 2271 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 COL4A2P08572 1712 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 DYTNA2CJ06 578 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 LACTBL1A8MY62 500 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 K7EQS6 105 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 PIRO00625 290 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 CYB561D2O14569 222 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 SLC16A4O15374 487 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 PJA2O43164 708 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 AP5Z1O43299 807 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ASNA1O43681 348 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 RNASEH2AO75792 299 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 SOAT2O75908 522 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 NFATC1O95644 943 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 CHEK2O96017 543 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 CYP1A1P04798 512 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 POLBP06746 335 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 OR52Z1P0C646 297 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 CKMT1AP12532 417 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 HMGA1P17096 107 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ATF6P18850 670 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 BTF3P20290 206 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 BCKDHBP21953 392 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 RPL13P26373 211 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ACVR2AP27037 513 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 KRT9P35527 623 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 PDE6CP51160 858 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 RAP2BP61225 183 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 MPP1Q00013 466 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 TRIP6Q15654 476 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 COL28A1Q2UY09 1125 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 CRB2Q5IJ48 1285 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 EOGTQ5NDL2 527 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 LYSMD4Q5XG99 296 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 LIN54Q6MZP7 749 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 RINT1Q6NUQ1 792 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 SLC36A4Q6YBV0 504 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 CCNI2Q6ZMN8 369 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 KRBA2Q6ZNG9 492 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 C1orf186Q6ZWK4 172 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 TMEM150AQ86TG1 271 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 LRRTM4Q86VH4 590 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 TMEFF1Q8IYR6 380 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ESX1Q8N693 406 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 FNIP1Q8TF40 1166 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ADAMTS14Q8WXS8 1223 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 SCAMP4Q969E2 229 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 LIN37Q96GY3 246 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 TINAGL1Q9GZM7 467 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 LINC00597Q9H2U6 94 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ASB7Q9H672 318 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 WASH6PQ9NQA3 447 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 DDX19AQ9NUU7 478 aaKnown RBP6.39□□□□□ -1.39
CPSF7-222ENST00000544585 SLC45A2Q9UMX9 530 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 TMEM98Q9Y2Y6 226 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 DERAQ9Y315 318 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 ITIH6Q6UXX5 1313 aa6.39□□□□□ -1.39
CPSF7-222ENST00000544585 THADAQ6YHU6 1953 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 TRAV19A0A0A6YYK7 116 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 LOC102723971A0A1B0GUV8 181 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 HMX3A6NHT5 357 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 E9PMD0 336 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 SLC9A3R1O14745 358 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 CTDNEP1O95476 244 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 CFIP05156 583 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 ZNF888P0CJ79 500 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 CXCL8P10145 99 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 PIM1P11309 404 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 U2AF2P26368 475 aaKnown RBP eCLIP6.38□□□□□ -1.399e-9■■■□□ 15
CPSF7-222ENST00000544585 SLC6A4P31645 630 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 PTGER3P43115 390 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 TNFRSF4P43489 277 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 RXRGP48443 463 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 PAPOLAP51003 745 aaKnown RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 CLRN1P58418 232 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 TSPY1Q01534 308 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 POU5F1Q01860 360 aaKnown RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 SPAG1Q07617 926 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 MRPL49Q13405 166 aaKnown RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 PDE1CQ14123 709 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 ZNF77Q15935 545 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 MAPKAPK3Q16644 382 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 PREPLQ4J6C6 727 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 C9orf57Q5W0N0 161 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 FAM180BQ6P0A1 224 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 CRTC1Q6UUV9 634 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 C1orf122Q6ZSJ8 110 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 CENPQQ7L2Z9 268 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-222ENST00000544585 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 EFCAB13Q8IY85 973 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
CPSF7-222ENST00000544585 PDILTQ8N807 584 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms