RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 IPO7O95373 1038 aaKnown RBP3.86□□□□□ -1.79
SCFD1-207ENST00000544052 MT-CYBP00156 380 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-207ENST00000544052 LCKP06239 509 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 TSPY4P0CV99 314 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 TSPY10P0CW01 314 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 GABRB1P18505 474 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 CDH2P19022 906 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-207ENST00000544052 CDAP32320 146 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 RFC1P35251 1148 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-207ENST00000544052 SLC16A2P36021 539 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 CLCN3P51790 818 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 PRAMEP78395 509 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 BMP2KLQ5H9B9 411 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 RAB41Q5JT25 222 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 PRAMEF19Q5SWL8 479 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 MIS18BP1Q6P0N0 1132 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 LCTLQ6UWM7 567 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 ZNF788Q6ZQV5 615 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 GSTA5Q7RTV2 222 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 KDELC2Q7Z4H8 507 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 GPSM1Q86YR5 675 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 LINC00346Q8IVM7 164 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 SLC35F3Q8IY50 421 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 DPP10Q8N608 796 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 BCAS4Q8TDM0 211 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 SIN3AQ96ST3 1273 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 AGAP2Q99490 1192 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 MXRA8Q9BRK3 442 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 C1QTNF5Q9BXJ0 243 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 PNRC2Q9NPJ4 139 aaKnown RBP3.86□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM184CQ9NVA4 438 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM45AQ9NWC5 275 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 DLGAP2Q9P1A6 1054 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 SUCLA2Q9P2R7 463 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-207ENST00000544052 NENFQ9UMX5 172 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 CARD8Q9Y2G2 431 aa3.86□□□□□ -1.79
SCFD1-207ENST00000544052 TRBV5-3A0A0A0MS03 114 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 KIR2DS5A0A0G2JLQ3 304 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 A6NNC1 897 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 KIR2DS3K7RE56 304 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 HSPB6O14558 160 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 TP73O15350 636 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 BMP5P22003 454 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 TNFSF8P32971 234 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 SHMT1P34896 483 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 GALCP54803 685 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 DRAP1Q14919 205 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 SMTNL2Q2TAL5 461 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 TTC39AQ5SRH9 613 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 PLEKHS1Q5SXH7 462 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 PAPD7Q5XG87 772 aaKnown RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 SLC30A6Q6NXT4 461 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM71Q6P5X7 295 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 SARM1Q6SZW1 724 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 QSOX2Q6ZRP7 698 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 NEK9Q8TD19 979 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 DPF1Q92782 380 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 CLMNQ96JQ2 1002 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 MRIQ9BWK5 157 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 R3HDMLQ9H3Y0 253 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 PDZD7Q9H5P4 517 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 MAGEE1Q9HCI5 957 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 RANGRFQ9HD47 186 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 PAPOLBQ9NRJ5 636 aaKnown RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 SETD4Q9NVD3 440 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 FBXL17Q9UF56 701 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 AGO2Q9UKV8 859 aaKnown RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 AAR2Q9Y312 384 aaKnown RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM2Q9UHN6 1383 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 XRN1Q8IZH2 1706 aaKnown RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 COL16A1Q07092 1604 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 A0A096LPK6 155 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 A0A1W2PRG0 241 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 KLK8O60259 260 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 RB1P06400 928 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 PRR35P0CG20 571 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 IL11P20809 199 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ATP5F1P24539 256 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ACVRL1P37023 503 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 NNMTP40261 264 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ARHGAP25P42331 645 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 INHBCP55103 352 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ZNF91Q05481 1191 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 OLIG2Q13516 323 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 CCDC96Q2M329 555 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ASTE1Q2TB18 679 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ESCO2Q56NI9 601 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 ASPHD1Q5U4P2 390 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 GLDNQ6ZMI3 551 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 FAM217AQ8IXS0 508 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 GABPB2Q8TAK5 448 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-207ENST00000544052 JAKMIP2Q96AA8 810 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 RNF183Q96D59 192 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 AP1M1Q9BXS5 423 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 TXLNGYQ9BZA5 131 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 BPIFA1Q9NP55 256 aa3.85□□□□□ -1.79
SCFD1-207ENST00000544052 DDX4Q9NQI0 724 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms