RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GFM1Q96RP9 751 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 ATXN10Q9UBB4 475 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 NPEPPSL1A6NEC2 478 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 SIGLEC16A6NMB1 481 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 AZIN1O14977 448 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 ZW10O43264 779 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 RPS12P25398 132 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 PPP3CAQ08209 521 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 PLA2G4EQ3MJ16 856 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 GALNT18Q6P9A2 607 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 CRELD2Q6UXH1 353 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 C2orf73Q8N5S3 287 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 UBE2E3Q969T4 207 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 RERGQ96A58 199 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 CXorf40BQ96DE9 158 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 LMAN2LQ9H0V9 348 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 ALOX5P09917 674 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 NOS2P35228 1153 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 UGT1A5P35504 534 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 EIF2S3P41091 472 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 NBPF12Q5TAG4 269 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 BHLHB9Q6PI77 547 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 YTHDF3Q7Z739 585 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 GPR65Q8IYL9 337 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 DPF3Q92784 378 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 LGMNQ99538 433 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 MCMBPQ9BTE3 642 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 SP140LQ9H930 580 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 NEK6Q9HC98 313 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 FAM240BA0A1B0GVZ2 78 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 TSPAN4O14817 238 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 DBIP07108 87 aaKnown RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 ACADLP28330 430 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 NTRK3Q16288 839 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 OAFQ86UD1 273 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 AGBL3Q8NEM8 1001 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 OR8H1Q8NGG4 311 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 CIB1Q99828 191 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 C8orf4Q9NR00 106 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 PDP1Q9P0J1 537 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 TMCO1Q9UM00 188 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 CEP170Q5SW79 1584 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 HDAC3O15379 428 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 METTL18O95568 372 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 OTCP00480 354 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 IFNA6P05013 189 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 CYP1A2P05177 515 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 NR2F6P10588 404 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 CXCR2P25025 360 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 MNDAP41218 407 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 PCDH1Q08174 1060 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ITGA7Q13683 1181 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 FSCN1Q16658 493 aaKnown RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 CMC1Q7Z7K0 106 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 TRPV1Q8NER1 839 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 CD101Q93033 1021 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 MYOCQ99972 504 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 RIOX1Q9H6W3 641 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 SPON1Q9HCB6 807 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 REREQ9P2R6 1566 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 GABRB2P47870 512 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 TTPAP49638 278 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ILF2Q12905 390 aaKnown RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 SIM2Q14190 667 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 SENP8Q96LD8 212 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 GPER1Q99527 375 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 GPN1Q9HCN4 374 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 NFASCO94856 1347 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 CAPN8A6NHC0 703 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 SLC22A3O75751 556 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 UGT2B17O75795 530 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 DHFRP00374 187 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 RAB27AP51159 221 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ARF3P61204 181 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 ARF1P84077 181 aaKnown RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 CLIP4Q8N3C7 705 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ZNF248Q8NDW4 579 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 EPS8L1Q8TE68 723 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ATG10Q9H0Y0 220 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ASB7Q9H672 318 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 WDR55Q9H6Y2 383 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 RPTORQ8N122 1335 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 GLI2P10070 1586 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ISM1B1AKI9 464 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 FGF10O15520 208 aaPredicted RBP15.47■□□□□ 0.07
CHD4-210ENST00000544040 RECQL4O94761 1208 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 MEA1Q16626 185 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 FAAH2Q6GMR7 532 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 FAM151BQ6UXP7 276 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ZNF607Q96SK3 696 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 KCNS3Q9BQ31 491 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 C1QTNF7Q9BXJ2 289 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 SPATC1LQ9H0A9 340 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 TMLHEQ9NVH6 421 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 ZNF780BQ9Y6R6 833 aa15.47■□□□□ 0.07
CHD4-210ENST00000544040 A0A0J9YYE9 177 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 IL1R1P14778 569 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 MPSTP25325 297 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms