RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 WDFY4Q6ZS81 3184 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C1orf232A0A0U1RR37 186 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 IGLON5A6NGN9 336 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LZTS3O60299 673 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SLC4A1P02730 911 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C6P13671 934 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MRPS25P82663 173 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ACOX1Q15067 660 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CNGA3Q16281 694 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SETMARQ53H47 684 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LRRC66Q68CR7 880 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CRTC1Q6UUV9 634 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 RANBP10Q6VN20 620 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LIPIQ6XZB0 460 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TSPAN33Q86UF1 283 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DNAAF3Q8N9W5 541 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 BLOC1S5Q8TDH9 187 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SRPK1Q96SB4 655 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TRIM51Q9BSJ1 452 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MIR1-1HGQ9H1L0 117 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 EPC1Q9H2F5 836 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MAGEE1Q9HCI5 957 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 EIF2B3Q9NR50 452 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SHOC2Q9UQ13 582 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 COQ6Q9Y2Z9 468 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 A0A0U1RQS6 177 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GOLGA8CPA6NN73 597 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SLC31A1O15431 190 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 RAD51CO43502 376 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SUN1O94901 812 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 HEXIM1O94992 359 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CLDN7O95471 211 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 IGHV4-34P06331 123 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ZNF30P17039 623 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LHCGRP22888 699 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MAOBP27338 520 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ZNF284Q2VY69 593 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TMEM259Q4ZIN3 620 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 WDR45BQ5MNZ6 344 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LYSMD3Q7Z3D4 306 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 OR52K1Q8NGK4 314 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LYSMD1Q96S90 227 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SLC17A9Q9BYT1 436 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GPR63Q9BZJ6 419 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TRIM31Q9BZY9 425 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ZFYVE1Q9HBF4 777 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PIH1D1Q9NWS0 290 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 EIF2B4Q9UI10 523 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SMG5Q9UPR3 1016 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ZNF711Q9Y462 761 aa14.51□□□□□ -0.09
TNFRSF1A-216ENST00000543995 FAM187AA6NFU0 413 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 EFCAB8A8MWE9 144 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LATO43561 262 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PAK4O96013 591 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TPSB2P20231 275 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ITPKAP23677 461 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SARNPP82979 210 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CREB5Q02930 508 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CDH17Q12864 832 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TPSAB1Q15661 275 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C8orf74Q6P047 294 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CYP2U1Q7Z449 544 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GLT6D1Q7Z4J2 308 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PCGF5Q86SE9 256 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CPT1BQ92523 772 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MYOCQ99972 504 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CARD6Q9BX69 1037 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C1QTNF7Q9BXJ2 289 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 HACD3Q9P035 362 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SPO11Q9Y5K1 396 aa14.5□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PLXNA2O75051 1894 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TNRC6BQ9UPQ9 1833 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 A0A1W2PPC4 97 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TCRBV7S3A2A0A539 114 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PSMD11O00231 422 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 RECQL5O94762 991 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TPH1P17752 444 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CD27P26842 260 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 NUDT1P36639 197 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GRIA1P42261 906 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CDK16Q00536 496 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PTSQ03393 145 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 KCNJ11Q14654 390 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 IZUMO3Q5VZ72 239 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DENND5AQ6IQ26 1287 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 HSD11B1LQ7Z5J1 315 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PPIL6Q8IXY8 311 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SERAC1Q96JX3 654 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C1QTNF2Q9BXJ5 285 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SEMA4AQ9H3S1 761 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TRABDQ9H4I3 376 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 EBF2Q9HAK2 575 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ARNT2Q9HBZ2 717 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 FZD3Q9NPG1 666 aa14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 UTP11Q9Y3A2 253 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ATXN2Q99700 1313 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MYLKQ15746 1914 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DNALI1O14645 258 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 WNT9AO14904 365 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms