RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FGF1P05230 155 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 ELFN1P0C7U0 828 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 PIRTP0C851 137 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 C6P13671 934 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 LHCGRP22888 699 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 CD27P26842 260 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 PTGIRP43119 386 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 NHLH1Q02575 133 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 CREB5Q02930 508 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 GPS1Q13098 491 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 FGL2Q14314 439 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 CNGA3Q16281 694 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 SETMARQ53H47 684 aaPredicted RBP13.66□□□□□ -0.22
SP140-213ENST00000543928 LRRC66Q68CR7 880 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 DENND2CQ68D51 928 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 LAIR1Q6GTX8 287 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 CRTC1Q6UUV9 634 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 RANBP10Q6VN20 620 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 LIPIQ6XZB0 460 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 ZNF572Q7Z3I7 529 aaPredicted RBP13.66□□□□□ -0.22
SP140-213ENST00000543928 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 PIGKQ92643 395 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 LOXL4Q96JB6 756 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 LYSMD1Q96S90 227 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 ORAI3Q9BRQ5 295 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 C1QTNF2Q9BXJ5 285 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 SLC17A9Q9BYT1 436 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 COQ6Q9Y2Z9 468 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 VPS13AQ96RL7 3174 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 ATXN2Q99700 1313 aaKnown RBP13.65□□□□□ -0.22
SP140-213ENST00000543928 DMDP11532 3685 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.65□□□□□ -0.22
SP140-213ENST00000543928 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 A0A1W2PPC4 97 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 LZTS3O60299 673 aaPredicted RBP13.65□□□□□ -0.22
SP140-213ENST00000543928 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
SP140-213ENST00000543928 EPN2O95208 641 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 PAK4O96013 591 aaPredicted RBP13.65□□□□□ -0.22
SP140-213ENST00000543928 LMNAP02545 664 aaKnown RBP13.65□□□□□ -0.22
SP140-213ENST00000543928 APRTP07741 180 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 NUDT1P36639 197 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 TERF1P54274 439 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 DR1Q01658 176 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 SGCGQ13326 291 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 PTK6Q13882 451 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 ACOX1Q15067 660 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 NAPEPLDQ6IQ20 393 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 PHOX2BQ99453 314 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 MAGEE1Q9HCI5 957 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 SHOC2Q9UQ13 582 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 SPO11Q9Y5K1 396 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 SLCO1B1Q9Y6L6 691 aa13.65□□□□□ -0.22
SP140-213ENST00000543928 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 LRRK1Q38SD2 2015 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 GOLGA8CPA6NN73 597 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 PROB1E7EW31 1015 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 PSMD11O00231 422 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 TTI1O43156 1089 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 RECQL5O94762 991 aaPredicted RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 SUN1O94901 812 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 CLDN7O95471 211 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 C1SP09871 688 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 ZNF30P17039 623 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 PTSQ03393 145 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 DHX34Q14147 1143 aaKnown RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 CDKN3Q16667 212 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 DENND5AQ6IQ26 1287 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 SYDE1Q6ZW31 735 aaPredicted RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 LYSMD3Q7Z3D4 306 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 HSD11B1LQ7Z5J1 315 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 LINC00523Q86TU6 105 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 SYT12Q8IV01 421 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 C1orf216Q8TAB5 229 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 CCHCR1Q8TD31 782 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 BLOC1S5Q8TDH9 187 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 SERAC1Q96JX3 654 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 SRPK1Q96SB4 655 aaKnown RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 MYOCQ99972 504 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 ARRDC1-AS1Q9H2J1 176 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 ARNT2Q9HBZ2 717 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 FZD3Q9NPG1 666 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 EIF2B3Q9NR50 452 aaKnown RBP13.64□□□□□ -0.23
SP140-213ENST00000543928 TMEM74BQ9NUR3 256 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 ASIC3Q9UHC3 531 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 GMEB2Q9UKD1 530 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 DMTF1Q9Y222 760 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 PCDHGA5Q9Y5G8 931 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 MYO15AQ9UKN7 3530 aa13.64□□□□□ -0.23
SP140-213ENST00000543928 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
SP140-213ENST00000543928 PRAMEF26H0Y7S4 382 aa13.63□□□□□ -0.23
SP140-213ENST00000543928 HAX1O00165 279 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms