RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PPM1JQ5JR12 505 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 LYSMD4Q5XG99 296 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 ALG1LQ6GMV1 187 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 RETSATQ6NUM9 610 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 C14orf80Q86SX3 495 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 PRUNE1Q86TP1 453 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 TMEM135Q86UB9 458 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 ZNF354CQ86Y25 554 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 TRIM42Q8IWZ5 723 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 TMEFF1Q8IYR6 380 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 AHI1Q8N157 1196 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 KDM1BQ8NB78 822 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 FIBINQ8TAL6 211 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 CEP76Q8TAP6 659 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 CABS1Q96KC9 395 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 RANBP9Q96S59 729 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 PLCD4Q9BRC7 762 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 EDEM2Q9BV94 578 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 MKRN2Q9H000 416 aaKnown RBP11.57□□□□□ -0.56
COPS7A-217ENST00000543537 NSRP1Q9H0G5 558 aaKnown RBP11.57□□□□□ -0.56
COPS7A-217ENST00000543537 FBRSQ9HAH7 460 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 ITM2CQ9NQX7 267 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 TMEM74BQ9NUR3 256 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 EURLQ9NYK6 297 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 CHMP2BQ9UQN3 213 aa11.57□□□□□ -0.56
COPS7A-217ENST00000543537 A0A1W2PQ67 120 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 TCRBV7S3A2A0A539 114 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 HEATR9A2RTY3 570 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 FAM47DPA6NHR8 397 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 FAM159BA6NKW6 160 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 UPK3BL1B0FP48 263 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 UPK3BL2E5RIL1 263 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 MAP3K6O95382 1288 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 RHOCP08134 193 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 SERPINF2P08697 491 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 DLDP09622 509 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PABPC1P11940 636 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 BRAFP15056 766 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 NFKB1P19838 968 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 SSTR1P30872 391 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 SLC6A4P31645 630 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 CCT5P48643 541 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 IRAK1P51617 712 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 SGSHP51688 502 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 COPAP53621 1224 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 IRX4P78413 519 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 RPL6Q02878 288 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 LBRQ14739 615 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PTPRNQ16849 979 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 GRTP1Q5TC63 336 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PDPK2PQ6A1A2 396 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 B4GALNT4Q76KP1 1039 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 TRABD2AQ86V40 505 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 EXOC3L1Q86VI1 746 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 TMPRSS6Q8IU80 811 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 ANKMY2Q8IV38 441 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PPHLN1Q8NEY8 458 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 CADM4Q8NFZ8 388 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 EPS8L3Q8TE67 593 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 DNASE2BQ8WZ79 361 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PIGKQ92643 395 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 FOXJ1Q92949 421 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 GRAMD1AQ96CP6 724 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 IMP4Q96G21 291 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 CELF6Q96J87 481 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PRICKLE1Q96MT3 831 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PSKH2Q96QS6 385 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PAFAH2Q99487 392 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 CPNE1Q99829 537 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 TBL1YQ9BQ87 522 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 C2orf49Q9BVC5 232 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 KIFC1Q9BW19 673 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 PCED1AQ9H1Q7 454 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 EPN3Q9H201 632 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 CAPN10Q9HC96 672 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 TMEM9BQ9NQ34 198 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 ABCB8Q9NUT2 735 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 WSB2Q9NYS7 404 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 KIAA1522Q9P206 1035 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 UBA2Q9UBT2 640 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 ZNF212Q9UDV6 495 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 GGA2Q9UJY4 613 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 SOX13Q9UN79 622 aa11.56□□□□□ -0.56
COPS7A-217ENST00000543537 ASCC3Q8N3C0 2202 aaKnown RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 MUC22E2RYF6 1773 aaPredicted RBP11.56□□□□□ -0.56
COPS7A-217ENST00000543537 GMNCA6NCL1 334 aa11.55□□□□□ -0.56
COPS7A-217ENST00000543537 PATE3B3GLJ2 98 aa11.55□□□□□ -0.56
COPS7A-217ENST00000543537 PFDN6O15212 129 aa11.55□□□□□ -0.56
COPS7A-217ENST00000543537 SYNCRIPO60506 623 aaKnown RBP11.55□□□□□ -0.56
COPS7A-217ENST00000543537 TSPAN3O60637 253 aa11.55□□□□□ -0.56
COPS7A-217ENST00000543537 ATP5BP06576 529 aaKnown RBP11.55□□□□□ -0.56
COPS7A-217ENST00000543537 CSRP1P21291 193 aaKnown RBP11.55□□□□□ -0.56
COPS7A-217ENST00000543537 ITPKAP23677 461 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms