RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MAJINQ3KP22 176 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TEX44Q53QW1 395 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 C2orf27AQ580R0 203 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 WLSQ5T9L3 541 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 KHDRBS2Q5VWX1 349 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 VITQ6UXI7 678 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 IRF2BP2Q7Z5L9 587 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TAF8Q7Z7C8 310 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PARGQ86W56 976 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GALNT13Q8IUC8 556 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TCAIMQ8N3R3 496 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 NETO2Q8NC67 525 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PXYLP1Q8TE99 480 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 WFIKKN2Q8TEU8 576 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 FNIP1Q8TF40 1166 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PRCCQ92733 491 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 EXOSC4Q9NPD3 245 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 INTS7Q9NVH2 962 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ATAD3AQ9NVI7 634 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PRKAG3Q9UGI9 489 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GPN3Q9UHW5 284 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDHGC3Q9UN70 934 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GLYATL1P3A0A0U1RQE8 302 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SIN3BO75182 1162 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SNAI1O95863 264 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GSNP06396 782 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 POU1F1P28069 291 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 DGKEP52429 567 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 POLE2P56282 527 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 AP1S1P61966 158 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SP2Q02086 613 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 AUHQ13825 339 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 KYAT3Q6YP21 454 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GALNT4Q8N4A0 578 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 OR7D4Q8NG98 312 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ZFP28Q8NHY6 868 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 FAXDC2Q96IV6 333 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SUSD3Q96L08 255 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC9A7Q96T83 725 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TNKS2Q9H2K2 1166 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TMBIM4Q9HC24 238 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ELOVL2Q9NXB9 296 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PMF1-BGLAPU3KQ54 211 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 H0Y858 1186 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC31A1O15431 190 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CD3EAPO15446 510 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 FGF18O76093 207 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 NDST3O95803 873 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ALPPL2P10696 532 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 COX7A2P14406 83 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF23P17027 643 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 TFEBP19484 476 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 L1CAMP32004 1257 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PTPN9P43378 593 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 MARCKSL1P49006 195 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 TMC3Q7Z5M5 1100 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PTGR2Q8N8N7 351 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 SPPL2AQ8TCT8 520 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 THRSPQ92748 146 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 NDNQ99608 321 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 RAD9AQ99638 391 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 MAPRE3Q9UPY8 281 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 OR10H1Q9Y4A9 318 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PRMT5O14744 637 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 LRIG2O94898 1065 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ASLP04424 464 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CNPP09543 421 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 MAGEA9P43362 315 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 IRAK1P51617 712 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 AP5B1Q2VPB7 878 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PLEKHA7Q6IQ23 1121 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 KDM7AQ6ZMT4 941 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PLD6Q8N2A8 252 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 LRRN4Q8WUT4 740 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 C8orf48Q96LL4 319 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 OSBPL10Q9BXB5 764 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 DPEP2Q9H4A9 486 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM83DQ9H4H8 585 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 DCAF16Q9NXF7 216 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ATP6V1HQ9UI12 483 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CYTH4Q9UIA0 394 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC12A4Q9UP95 1085 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 NDUFAF1Q9Y375 327 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDHGB6Q9Y5F9 930 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 RGPD8O14715 1765 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM208AQ9UK61 1670 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CCT8L1PA6NM43 557 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 H3BM21 787 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ATG13O75143 517 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 S100A9P06702 114 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PABPC1P11940 636 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 GMFBP60983 142 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ARF3P61204 181 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 COPZ1P61923 177 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms