RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 IGFALSP35858 605 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 RABIFP47224 123 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 PFN3P60673 137 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 CNGA3Q16281 694 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 HLA-BQ31612 363 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 CBARPQ8N350 705 aaPredicted RBP18.44■□□□□ 0.54
COPS7A-216ENST00000543170 LPCAT1Q8NF37 534 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 MAIP1Q8WWC4 291 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 BMFQ96LC9 184 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 SPATA13Q96N96 652 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 PPP1R2P1Q96PQ5 205 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 FAM118BQ9BPY3 351 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 RSPH14Q9UHP6 348 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 ZKSCAN5Q9Y2L8 839 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 COQ6Q9Y2Z9 468 aa18.44■□□□□ 0.54
COPS7A-216ENST00000543170 C5orf60A6NFR6 353 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ANKRD66B4E2M5 251 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 YKT6O15498 198 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 LZTS3O60299 673 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-216ENST00000543170 RECQL5O94762 991 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-216ENST00000543170 MT-CYBP00156 380 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ALPIP09923 528 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 GM2AP17900 193 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 CCT8P50990 548 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 CLDN2P57739 230 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 CDK18Q07002 472 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 MPP3Q13368 585 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ARHGEF7Q14155 803 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 LRRC14Q15048 493 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 IRF4Q15306 451 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 QPCTQ16769 361 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 WSCD2Q2TBF2 565 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ANKRD20A2Q5SQ80 823 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ANKRD20A1Q5TYW2 823 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ANKRD20A3Q5VUR7 823 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 KDELC1Q6UW63 502 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 OR13H1Q8NG92 308 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 SPATA22Q8NHS9 363 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 RMDN1Q96DB5 314 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 RTP4Q96DX8 246 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 COQ10AQ96MF6 247 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 ELF4Q99607 663 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-216ENST00000543170 C10orf88Q9H8K7 445 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 TRMT1Q9NXH9 659 aaKnown RBP18.43■□□□□ 0.54
COPS7A-216ENST00000543170 PYCARDQ9ULZ3 195 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 PCDHGB2Q9Y5G2 931 aa18.43■□□□□ 0.54
COPS7A-216ENST00000543170 CABIN1Q9Y6J0 2220 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 POM121BA6NF01 834 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 TM4SF5O14894 197 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 LIASO43766 372 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 ANXA9O76027 345 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 NDST3O95803 873 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 EPOP01588 193 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 CTPS1P17812 591 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 HNF1BP35680 557 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 YPEL5P62699 121 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 SEMG2Q02383 582 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 MTM1Q13496 603 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 PUM1Q14671 1186 aaKnown RBP eCLIP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 OASLQ15646 514 aaKnown RBP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 ZNF569Q5MCW4 686 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 CRTC1Q6UUV9 634 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 Q6ZSR6 202 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 PTAR1Q7Z6K3 402 aaPredicted RBP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 SPATS2Q86XZ4 545 aaKnown RBP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 SLC22A18ASQ8N1D0 253 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 SLC35F6Q8N357 371 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 OR2I1PQ8NGU4 316 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 IFT43Q96FT9 208 aa18.42■□□□□ 0.54
COPS7A-216ENST00000543170 SRPK1Q96SB4 655 aaKnown RBP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 MLPHQ9BV36 600 aaPredicted RBP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
COPS7A-216ENST00000543170 SPTBN4Q9H254 2564 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 A0A1B0GTQ1 180 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 LOC285095A0A1B0GVY8 99 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 ENC1O14682 589 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 PCDHGA12O60330 932 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 FGGP02679 453 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 ID4P47928 161 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 RXRGP48443 463 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 ARRB1P49407 418 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-216ENST00000543170 GEMP55040 296 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 SIX1Q15475 284 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-216ENST00000543170 PCSK7Q16549 785 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 FAM182AQ5T1J6 154 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 LRRC66Q68CR7 880 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 ESRP1Q6NXG1 681 aaKnown RBP18.41■□□□□ 0.54
COPS7A-216ENST00000543170 DRICH1Q6PGQ1 229 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-216ENST00000543170 TSPAN33Q86UF1 283 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 KLHDC8BQ8IXV7 354 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 NUS1Q96E22 293 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 DTD2Q96FN9 168 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 OXNAD1Q96HP4 312 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-216ENST00000543170 PBKQ96KB5 322 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 MRGPRX2Q96LB1 330 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 IL21RQ9HBE5 538 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 MBNL1Q9NR56 388 aaKnown RBP18.41■□□□□ 0.54
COPS7A-216ENST00000543170 TM7SF3Q9NS93 570 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 KCND1Q9NSA2 647 aa18.41■□□□□ 0.54
COPS7A-216ENST00000543170 AAR2Q9Y312 384 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms