RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 TNFP01375 233 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 FAM228BP0C875 321 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 LHCGRP22888 699 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 TRIM23P36406 574 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 RENBPP51606 427 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 POLR2LP62875 67 aaKnown RBP12.09□□□□□ -0.47
PTPN6-220ENST00000543115 CCL7P80098 99 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SKOR1P84550 965 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 TRAF2Q12933 501 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SPIDRQ14159 915 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 PIGHQ14442 188 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-220ENST00000543115 ZNF235Q14590 738 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 ACOX1Q15067 660 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 CNGA3Q16281 694 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 BOLA3Q53S33 107 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 FOXR1Q6PIV2 292 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 TMCO3Q6UWJ1 677 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 GKN2Q86XP6 184 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 CPNE8Q86YQ8 564 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SDR16C5Q8N3Y7 309 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 GPR156Q8NFN8 814 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 CCL4L1Q8NHW4 92 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 PDCD6IPQ8WUM4 868 aaKnown RBP12.09□□□□□ -0.47
PTPN6-220ENST00000543115 KCNE4Q8WWG9 221 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SCG3Q8WXD2 468 aaKnown RBP12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 GRAMD1AQ96CP6 724 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 COQ10AQ96MF6 247 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPN6-220ENST00000543115 TMEM168Q9H0V1 697 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 CPNE5Q9HCH3 593 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 THSD1Q9NS62 852 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 ANAPC7Q9UJX3 599 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
PTPN6-220ENST00000543115 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 A0A0U1RQS6 177 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 A0A1W2PQJ5 194 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CACNB4O00305 520 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 KLK10O43240 276 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 NOBOXO60393 691 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 SOCS5O75159 536 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CPP00450 1065 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 FUCA1P04066 466 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CD48P09326 243 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 IL4RP24394 825 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 RBMS1P29558 406 aaKnown RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 PNCKQ6P2M8 343 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 OGFOD3Q6PK18 319 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 TSPAN33Q86UF1 283 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CBARPQ8N350 705 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 ATPAF2Q8N5M1 289 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 NIPA2Q8N8Q9 360 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 ATL2Q8NHH9 583 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 WDR48Q8TAF3 677 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CPLX3Q8WVH0 158 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 TEKT4Q8WW24 435 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 SMIM14Q96QK8 99 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 NUP85Q9BW27 656 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 FOXP3Q9BZS1 431 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 WDR26Q9H7D7 661 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
PTPN6-220ENST00000543115 CCDC187A0A096LP49 1063 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 TEX51A0A1B0GUA7 166 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 PRSS38A1L453 326 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 NPIPB15A6NHN6 443 aaPredicted RBP12.07□□□□□ -0.48
PTPN6-220ENST00000543115 D6RAR5 112 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 TNFRSF10CO14798 259 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 MFSD11O43934 449 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 TNFSF15O95150 251 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 SERPING1P05155 500 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 CYP1A2P05177 515 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 RPLP0P05388 317 aaKnown RBP12.07□□□□□ -0.48
PTPN6-220ENST00000543115 HOXC4P09017 264 aaPredicted RBP12.07□□□□□ -0.48
PTPN6-220ENST00000543115 VIPR1P32241 457 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 HSPA9P38646 679 aaKnown RBP12.07□□□□□ -0.48
PTPN6-220ENST00000543115 ETV3P41162 512 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 ARSEP51690 589 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 CDH6P55285 790 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 IHHQ14623 411 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 ATP13A4Q4VNC1 1196 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 DENND2CQ68D51 928 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 RFLNAQ6ZTI6 216 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 TAF8Q7Z7C8 310 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 FAM46DQ8NEK8 389 aa12.07□□□□□ -0.48
PTPN6-220ENST00000543115 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
PTPN6-220ENST00000543115 NUS1Q96E22 293 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms