RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 H3BNX3 289 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 CD3EAPO15446 510 aaKnown RBP13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 COCHO43405 550 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 FKBP6O75344 327 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 SEC24AO95486 1093 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 IRF1P10914 325 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 ENO3P13929 434 aaPredicted RBP13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 OR1D2P34982 312 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 KPNA2P52292 529 aaKnown RBP13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 HK2P52789 917 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 ATXN3P54252 364 aaPredicted RBP13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 ACVR1Q04771 509 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 CDC16Q13042 620 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 DHDDSQ86SQ9 333 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 TSPAN17Q96FV3 270 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 CYP2S1Q96SQ9 504 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 HMX1Q9NP08 348 aaPredicted RBP13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 DONSONQ9NYP3 566 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 ANKRD12Q6UB98 2062 aa13.71□□□□□ -0.21
SLC3A2-220ENST00000542922 MKI67P46013 3256 aaKnown RBP13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 SLCO1B7G3V0H7 640 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 H3BMM5 538 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 PPP6CO00743 305 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 CFLARO15519 480 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 TSPAN3O60637 253 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 FGF1P05230 155 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 FDXRP22570 491 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 CCL23P55773 120 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 ACAP2Q15057 778 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 CYHR1Q6ZMK1 362 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 LMNTD2Q8IXW0 634 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 PELI3Q8N2H9 469 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 KYQ8NBH2 561 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 RP9Q8TA86 221 aaKnown RBP13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 CDRT15Q96T59 188 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 MGME1Q9BQP7 344 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 TTLL2Q9BWV7 592 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 NACA2Q9H009 215 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 DNMT3LQ9UJW3 386 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 IKZF3Q9UKT9 509 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 PHF24Q9UPV7 400 aa13.71□□□□□ -0.22
SLC3A2-220ENST00000542922 GBF1Q92538 1859 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 TCAF2A6NFQ2 919 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 RPP40O75818 363 aaKnown RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 SIX3O95343 332 aaPredicted RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 GLP2RO95838 553 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 RAG1P15918 1043 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 PEX2P28328 305 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 ATP5C1P36542 298 aaKnown RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 CDKN1CP49918 316 aaPredicted RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 CDH13P55290 713 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 CEACAM7Q14002 265 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 OR4D1Q15615 310 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 KLC3Q6P597 504 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 AAGABQ6PD74 315 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 GALNT7Q86SF2 657 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 PXYLP1Q8TE99 480 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 SEPT8Q92599 483 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 ECSITQ9BQ95 431 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 GEMIN8Q9NWZ8 242 aaKnown RBP13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 PTGDR2Q9Y5Y4 395 aa13.7□□□□□ -0.22
SLC3A2-220ENST00000542922 ANAPC1Q9H1A4 1944 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 ATP6AP2A0A1C7CYW4 349 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 DPPA5A6NC42 116 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF840PA6NDX5 716 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 A6NHS1 94 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 H7C4K7 107 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 MAP3K13O43283 966 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 PQBP1O60828 265 aaKnown RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 ATP6AP2O75787 350 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 SERPINF2P08697 491 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 RBP1P09455 135 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 BMP1P13497 986 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 CD1DP15813 335 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 HOXD10P28358 340 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 CORO1AP31146 461 aaKnown RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 SCNN1BP51168 640 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 KLC1Q07866 573 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 C5orf22Q49AR2 442 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 UNC50Q53HI1 259 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 FBXO48Q5FWF7 155 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 FAM45BPQ6NSW5 357 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 FAM45AQ8TCE6 357 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 RNF38Q9H0F5 515 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 CATSPERZQ9NTU4 200 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 UBXN8O00124 270 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 LIN7AO14910 233 aaPredicted RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 STC2O76061 302 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 SUPT7LO94864 414 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms