RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 B4DGG1 531 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 B8ZZF3 427 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 HGFP14210 728 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 RALGDSQ12967 914 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 C14orf28Q4W4Y0 310 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 AFMIDQ63HM1 303 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 PLEKHA7Q6IQ23 1121 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 OGFOD3Q6PK18 319 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 NYAP1Q6ZVC0 841 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 IRF2BP2Q7Z5L9 587 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 PSTKQ8IV42 348 aaKnown RBP17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 LZTR1Q8N653 840 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 KIAA1524Q8TCG1 905 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 PSKH2Q96QS6 385 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 CMKLR1Q99788 373 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 SEMA4CQ9C0C4 833 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 MRPL40Q9NQ50 206 aaKnown RBP17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 TAS2R14Q9NYV8 317 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 SEPT10Q9P0V9 454 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 LRIT1Q9P2V4 623 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 MYO6Q9UM54 1294 aa17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 SETXQ7Z333 2677 aaKnown RBP17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 A0A1W2PQ67 120 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 NVLO15381 856 aaKnown RBP17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 TEX33O43247 280 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ZW10O43264 779 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ATMINO43313 823 aaPredicted RBP17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 MIPP30301 263 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 TRIM23P36406 574 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ZNF235Q14590 738 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 LBRQ14739 615 aaKnown RBP17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 TMCO4Q5TGY1 634 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 KCTD16Q68DU8 428 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 SPECC1LQ69YQ0 1117 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 PNCKQ6P2M8 343 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 USP53Q70EK8 1073 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 SPRED1Q7Z699 444 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ARHGAP12Q8IWW6 846 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ZNF599Q96NL3 588 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 TMEM168Q9H0V1 697 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ZWILCHQ9H900 591 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 KCTD5Q9NXV2 234 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 AKAP7Q9P0M2 348 aaPredicted RBP17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 ACSL6Q9UKU0 697 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 PCDHB11Q9Y5F2 797 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 RNF215Q9Y6U7 377 aa17.46■□□□□ 0.39
PPP1CA-210ENST00000542876 COL27A1Q8IZC6 1860 aaPredicted RBP17.46■□□□□ 0.38
PPP1CA-210ENST00000542876 PRSS38A1L453 326 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 TMEM191CA6NGB0 347 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 TRAFD1O14545 582 aaPredicted RBP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 NUDT21O43809 227 aaKnown RBP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 NOBOXO60393 691 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 LIPCP11150 499 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 HSPA9P38646 679 aaKnown RBP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 HCAR3P49019 387 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 BIRC2Q13490 618 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 HLTFQ14527 1009 aaKnown RBP eCLIP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 MAP9Q49MG5 647 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 PHF19Q5T6S3 580 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 ARHGAP36Q6ZRI8 547 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 BBS5Q8N3I7 341 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 NPWQ8N729 165 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 FNIP1Q8TF40 1166 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 PDCD6IPQ8WUM4 868 aaKnown RBP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 NUS1Q96E22 293 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 PEBP4Q96S96 227 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 CARS2Q9HA77 564 aaKnown RBP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 PHPT1Q9NRX4 125 aaPredicted RBP17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 B4GALT6Q9UBX8 382 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 SCINQ9Y6U3 715 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 COL6A6A6NMZ7 2263 aa17.45■□□□□ 0.38
PPP1CA-210ENST00000542876 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 H3BRJ5 948 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 AGRPO00253 132 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 SOCS5O75159 536 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 MYCLP1P12525 358 aaPredicted RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ATP1A3P13637 1013 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ARL4AP40617 200 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ZFP36L1Q07352 338 aaKnown RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ILF3Q12906 894 aaKnown RBP eCLIP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ASIC2Q16515 512 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 TMEM164Q5U3C3 297 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 DENND2CQ68D51 928 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 APTXQ7Z2E3 356 aaKnown RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ARFGAP1Q8N6T3 406 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 NSMCE1Q8WV22 266 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 SGF29Q96ES7 293 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 ARHGAP9Q9BRR9 750 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 SYT11Q9BT88 431 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 LGR4Q9BXB1 951 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 GSDMCQ9BYG8 508 aa17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 NAT10Q9H0A0 1025 aaKnown RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 SUDS3Q9H7L9 328 aaPredicted RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 CWC15Q9P013 229 aaKnown RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 CNOT8Q9UFF9 292 aaKnown RBP17.44■□□□□ 0.38
PPP1CA-210ENST00000542876 LRRC53A6NM62 1247 aa17.43■□□□□ 0.38
PPP1CA-210ENST00000542876 RHPN2P1A8MT19 583 aa17.43■□□□□ 0.38
PPP1CA-210ENST00000542876 LRCH4O75427 683 aa17.43■□□□□ 0.38
PPP1CA-210ENST00000542876 CPP00450 1065 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms