RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	OR6J1	Q8NGC5	347 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	SLC16A10	Q8TF71	515 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	TSPAN17	Q96FV3	270 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MRGPRX2	Q96LB1	330 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	SENP8	Q96LD8	212 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	PRKD2	Q9BZL6	878 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	SLC39A8	Q9C0K1	460 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MAP10	Q9P2G4	905 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	TDRKH	Q9Y2W6	561 aa	Known RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	IPP	Q9Y573	584 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	BRCA1	P38398	1863 aa	Known RBP	12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	LTBP3	Q9NS15	1303 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	SH3PXD2B	A1X283	911 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	TRIM64C	A6NLI5	447 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	AQP12B	A6NM10	295 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	BBIP1	A8MTZ0	92 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	FAS	P25445	335 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	VPS26B	Q4G0F5	336 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF678	Q5SXM1	525 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	AQP12A	Q8IXF9	295 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	LZTR1	Q8N653	840 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	CALML6	Q8TD86	181 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	DNAJB3	Q8WWF6	145 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	CYGB	Q8WWM9	190 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	GPATCH1	Q9BRR8	931 aa	Known RBP	12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	AKTIP	Q9H8T0	292 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	FAIM	Q9NVQ4	179 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNHIT2	Q9UHR6	403 aa		12.96	□□□□□ -0.33
DDX11-223	ENST00000542838	GIPC1	O14908	333 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	SMPD1	P17405	629 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	PSMA4	P25789	261 aa	Known RBP	12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	CDH13	P55290	713 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	ATP6V0D1	P61421	351 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	CAPRIN1	Q14444	709 aa	Known RBP	12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	IL31	Q6EBC2	164 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	RANBP10	Q6VN20	620 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	SMYD1	Q8NB12	490 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	EXT2	Q93063	718 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	HOPX	Q9BPY8	73 aa	Predicted RBP	12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	TRMO	Q9BU70	441 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	C9orf16	Q9BUW7	83 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	NPL	Q9BXD5	320 aa	Predicted RBP	12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	HIPK3	Q9H422	1215 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	AGPAT4	Q9NRZ5	378 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	GIMAP2	Q9UG22	337 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	NDUFAF1	Q9Y375	327 aa		12.96	□□□□□ -0.34
DDX11-223	ENST00000542838	UTRN	P46939	3433 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	HHLA1	C9JL84	531 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838		C9JVG2	144 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ANGPT2	O15123	496 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	FOXD2	O60548	495 aa	Predicted RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	CLIC3	O95833	236 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	LEPR	P48357	1165 aa	Known RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	KCNC1	P48547	511 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	SNX17	Q15036	470 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	GEN1	Q17RS7	908 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	SLC36A3	Q495N2	470 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	GPR158	Q5T848	1215 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	PATL1	Q86TB9	770 aa	Known RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	SLC15A3	Q8IY34	581 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ADAMTS16	Q8TE57	1224 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	UBXN10	Q96LJ8	280 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	TSPAN18	Q96SJ8	248 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	CXorf21	Q9HAI6	301 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	VWA7	Q9Y334	891 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ZNF701	M0R085	212 aa	Predicted RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ZBTB7A	O95365	584 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	UNC50	Q53HI1	259 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	PRMT9	Q6P2P2	845 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ELMSAN1	Q6PJG2	1045 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838		Q6ZNX1	250 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	CMTR2	Q8IYT2	770 aa	Known RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	CLYBL	Q8N0X4	340 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	LRRC43	Q8N309	656 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	SMG8	Q8ND04	991 aa	Known RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	THAP11	Q96EK4	314 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ZFP42	Q96MM3	310 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	KATNBL1	Q9H079	304 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	ABCD2	Q9UBJ2	740 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	OAZ3	Q9UMX2	235 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	NEU3	Q9UQ49	428 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	PTGDR2	Q9Y5Y4	395 aa		12.95	□□□□□ -0.34
DDX11-223	ENST00000542838	TMX2-CTNND1	H3BSU7	103 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	PTGES	O14684	152 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	ATE1	O95260	518 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	SMIM10L2A	P0DMW4	78 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	SMIM10L2B	P0DMW5	78 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	CAPN3	P20807	821 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	WNT3A	P56704	352 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	PMS2P3	Q13401	168 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	ATP6AP1	Q15904	470 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	LDB1	Q86U70	411 aa	Predicted RBP	12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	DQX1	Q8TE96	717 aa	Known RBP	12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	L3HYPDH	Q96EM0	354 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	CENPN	Q96H22	339 aa	Predicted RBP	12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	FBXL20	Q96IG2	436 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	FEM1C	Q96JP0	617 aa		12.94	□□□□□ -0.34
DDX11-223	ENST00000542838	PLEKHG4B	Q96PX9	1271 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms