RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TDRD15B5MCY1 1934 aaKnown RBP4.69□□□□□ -1.66
MDM2-228ENST00000542502 CHD9Q3L8U1 2897 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 A0A088AWK7 358 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 TTC26A0AVF1 554 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ARL5CA6NH57 179 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CAPN8A6NHC0 703 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 SMTNL1A8MU46 457 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 C5orf67F2Z3F1 127 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 PMM2O15305 246 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CSDE1O75534 798 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 ONECUT2O95948 504 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 TNNC2P02585 160 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 NR3C1P04150 777 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 IL6RP08887 468 aaPredicted RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 EPB41P11171 864 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 P4HA1P13674 534 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 NR2F2P24468 414 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CCNE1P24864 410 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CCKBRP32239 447 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 LIPAP38571 399 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 RAB1AP62820 205 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 FAM193AP78312 1265 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 HOXA4Q00056 320 aaPredicted RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 SPAG1Q07617 926 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 MYO1EQ12965 1108 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 SEMA5AQ13591 1074 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 TMEM132DQ14C87 1099 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 DAZAP2Q15038 168 aaPredicted RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 CNN3Q15417 329 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 SNRNP35Q16560 246 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 CAMK4Q16566 473 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 STX1AQ16623 288 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ZC2HC1CQ53FD0 456 aaPredicted RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 XKR4Q5GH76 650 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ICE2Q659A1 982 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 SFRP4Q6FHJ7 346 aaPredicted RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 DCLRE1AQ6PJP8 1040 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ALKAL1Q6UXT8 129 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 RBM43Q6ZSC3 357 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 RTL10Q7L3V2 364 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 DAAM2Q86T65 1068 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CHSY1Q86X52 802 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 FAM90A1Q86YD7 464 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 KIAA0895Q8NCT3 520 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CCDC150Q8NCX0 1101 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 C3orf20Q8ND61 904 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 BEST2Q8NFU1 509 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 SPATA18Q8TC71 538 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 LRRC15Q8TF66 581 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 TAF4BQ92750 862 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ANKRD36BP1Q96IX9 119 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CPB2Q96IY4 423 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 FAM81BQ96LP2 452 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ZNF558Q96NG5 402 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 ASB2Q96Q27 587 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 KIFC3Q9BVG8 833 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 DUSP22Q9NRW4 184 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 AGPAT3Q9NRZ7 376 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 RBAKQ9NYW8 714 aaPredicted RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 SPG21Q9NZD8 308 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 CPSF3Q9UKF6 684 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 ITGA11Q9UKX5 1188 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 MAFFQ9ULX9 164 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 UBQLN1Q9UMX0 589 aaKnown RBP4.68□□□□□ -1.66
MDM2-228ENST00000542502 PCDHA3Q9Y5H8 950 aa4.68□□□□□ -1.66
MDM2-228ENST00000542502 SMIM28A0A1B0GU29 152 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 TMEM189-UBE2V1I3L0A0 370 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 P4HA2O15460 535 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 INSIG1O15503 277 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 B4GALT5O43286 388 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 TGFB1I1O43294 461 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 MGEA5O60502 916 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 N4BP1O75113 896 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 TADA2AO75478 443 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 TMEM191BP0C7N4 346 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 SRGAP2BP0DMP2 458 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CBSLP0DN79 551 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 EEF1GP26641 437 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 ADSSP30520 456 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 ATICP31939 592 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CBSP35520 551 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 ARHGAP25P42331 645 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 PRCPP42785 496 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CLCN2P51788 898 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CASP5P51878 434 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CYP4F2P78329 520 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 DEFB103AP81534 67 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 SMARCB1Q12824 385 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 BIRC2Q13490 618 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 PSMD6Q15008 389 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 TRIP6Q15654 476 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 CCDC157Q569K6 752 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 C9orf50Q5SZB4 431 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 PXDC1Q5TGL8 231 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 RNF220Q5VTB9 566 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 DARS2Q6PI48 645 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 TMEM108Q6UXF1 575 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.67□□□□□ -1.662e-7■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms