RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
LDHA-220ENST00000542179 CIPCQ9C0C6 399 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 TNKS2Q9H2K2 1166 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 UBE2ZQ9H832 354 aaPredicted RBP9.28□□□□□ -0.92
LDHA-220ENST00000542179 MAGEE1Q9HCI5 957 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 C20orf96Q9NUD7 363 aaPredicted RBP9.28□□□□□ -0.92
LDHA-220ENST00000542179 NSMCE4AQ9NXX6 385 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.28□□□□□ -0.925e-12■■■□□ 17
LDHA-220ENST00000542179 SENP1Q9P0U3 644 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 BCCIPQ9P287 314 aaKnown RBP eCLIP9.28□□□□□ -0.92
LDHA-220ENST00000542179 CTNNAL1Q9UBT7 734 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 LIMD1Q9UGP4 676 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 PLA2G4CQ9UP65 541 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 PPIL1Q9Y3C6 166 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 STARD13Q9Y3M8 1113 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
LDHA-220ENST00000542179 A0A0J9YYE9 177 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 C2orf81A6NN90 581 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 H3BQ06 376 aaPredicted RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 SLC7A4O43246 635 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 KRT37O76014 449 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 KAT7O95251 611 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 TRBC1P01850 177 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 ERVK-10P10266 1014 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 KCNA5P22460 613 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 ARNTP27540 789 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 GRIA2P42262 883 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 RECQLP46063 649 aaPredicted RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 SLC18A1P54219 525 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 MESP2Q0VG99 397 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 ILF2Q12905 390 aaKnown RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 CNGA3Q16281 694 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SKIDA1Q1XH10 827 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 HSP90AA5PQ58FG0 334 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 GRTP1Q5TC63 336 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 KDM7AQ6ZMT4 941 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 TRABD2AQ86V40 505 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 KCNMB4Q86W47 210 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 NDUFAF2Q8N183 169 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 RYBPQ8N488 228 aaPredicted RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 ARFGAP2Q8N6H7 521 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 LPCAT1Q8NF37 534 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 MDGA1Q8NFP4 955 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 OR13J1Q8NGT2 312 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 GABPB2Q8TAK5 448 aaPredicted RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 FAM76AQ8TAV0 307 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 BLOC1S5Q8TDH9 187 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 STYXQ8WUJ0 223 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 CYB5D2Q8WUJ1 264 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 UCMAQ8WVF2 138 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 SORCS1Q8WY21 1168 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 PTPRN2Q92932 1015 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 MTBPQ96DY7 904 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SGSM3Q96HU1 749 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 CDX2Q99626 313 aaPredicted RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 CPNE1Q99829 537 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 HEPHQ9BQS7 1158 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 MCMBPQ9BTE3 642 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 OSBPL1AQ9BXW6 950 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SUV39H2Q9H5I1 410 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 BRD9Q9H8M2 597 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SSU72Q9NP77 194 aaKnown RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 PPANQ9NQ55 473 aaKnown RBP9.27□□□□□ -0.93
LDHA-220ENST00000542179 ZFATQ9P243 1243 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 TBK1Q9UHD2 729 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 PHTF1Q9UMS5 762 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SPO11Q9Y5K1 396 aa9.27□□□□□ -0.93
LDHA-220ENST00000542179 SPTBN5Q9NRC6 3674 aaKnown RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 CDH23Q9H251 3354 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 TSPAN11A1L157 253 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 TBC1D3BA6NDS4 549 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 TTC34A8MYJ7 566 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 C2CD4DB7Z1M9 353 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 NPC1O15118 1278 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 UGT1A9O60656 530 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 RPP40O75818 363 aaKnown RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 PIAS1O75925 651 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 KRT38O76015 456 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 VAPBO95292 243 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 PIGNO95427 931 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 APODP05090 189 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 SNRPAP09012 282 aaKnown RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 KRT15P19012 456 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 NR1D1P20393 614 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 LPOP22079 712 aaPredicted RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 SLC8A1P32418 973 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 HMGCLP35914 325 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 GP5P40197 560 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 TNFRSF4P43489 277 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 ZNF140P52738 457 aaPredicted RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 EPHB1P54762 984 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 CSE1LP55060 971 aaKnown RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 POLR2LP62875 67 aaKnown RBP9.26□□□□□ -0.93
LDHA-220ENST00000542179 PPP2R2AP63151 447 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 ENPP2Q13822 863 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 SEPT6Q14141 434 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 TMED2Q15363 201 aa9.26□□□□□ -0.93
LDHA-220ENST00000542179 CDKN3Q16667 212 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms