RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 LCATP04180 440 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 ALPLP05186 524 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 GALTP07902 379 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 CBSLP0DN79 551 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 T-ENOLP0DO92 83 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 NAGAP17050 411 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 PAX7P23759 505 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 HOXD3P31249 432 aaPredicted RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 CBSP35520 551 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 ACTN2P35609 894 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 HARS2P49590 506 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 CLCN5P51795 746 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 PMS2P54278 862 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 EIF3BP55884 814 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 HDAC4P56524 1084 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 RIPK4P57078 832 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 RPS3AP61247 264 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 CYP4A11Q02928 519 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 DSC1Q08554 894 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 FAM27E3Q08E93 113 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 NEXNQ0ZGT2 675 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 TRAF1Q13077 416 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 CHAF1BQ13112 559 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 GPS2Q13227 327 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 LPIN1Q14693 890 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 TAF11Q15544 211 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 SPECC1Q5M775 1068 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 SERTAD4-AS1Q5TG53 156 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 TMEM81Q6P7N7 255 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 TBC1D26Q86UD7 250 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 FBXL14Q8N1E6 418 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 PELI3Q8N2H9 469 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 MCPH1Q8NEM0 835 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 KCNG4Q8TDN1 519 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 USP6NLQ92738 828 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 ZC3HAV1LQ96H79 300 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 THOC3Q96J01 351 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 FEM1CQ96JP0 617 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 MARK4Q96L34 752 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 TTC14Q96N46 770 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 NR1H4Q96RI1 486 aaPredicted RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 MPHOSPH8Q99549 860 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 NTPCRQ9BSD7 190 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 POLR3CQ9BUI4 534 aaPredicted RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 USP44Q9H0E7 712 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 SNTG1Q9NSN8 517 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 HCFC1R1Q9NWW0 138 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 CHCHD3Q9NX63 227 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 KIAA1456Q9P272 454 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 NFKBIL1Q9UBC1 381 aaPredicted RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 ADD3Q9UEY8 706 aaKnown RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 SUN2Q9UH99 717 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 TMEM5Q9Y2B1 443 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 PIAS3Q9Y6X2 628 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 IGKV2D-30A0A075B6S6 120 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 hCG_1807616A0A1W2PRN6 198 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 SYNDIG1LA6NDD5 238 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 NPIPB15A6NHN6 443 aaPredicted RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 H0YHG0 523 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 P4HA2O15460 535 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 TNFSF14O43557 240 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 DKC1O60832 514 aaKnown RBP eCLIP3.34□□□□□ -1.87
USP28-210ENST00000542033 HMMRO75330 724 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 TACC1O75410 805 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 SEC14L2O76054 403 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 MTA2O94776 668 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 RPN1P04843 607 aaKnown RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 HOXC6P09630 235 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 COX7A2P14406 83 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 PORP16435 677 aaPredicted RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 HOXB6P17509 224 aaKnown RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 GNLYP22749 145 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 MYF6P23409 242 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 MAPK4P31152 587 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 ARRB2P32121 409 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 DCTDP32321 178 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 ABCD1P33897 745 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 TTKP33981 857 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 THPOP40225 353 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 TNNT3P45378 269 aaPredicted RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 RFX5P48382 616 aaPredicted RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 THBS3P49746 956 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 HTR6P50406 440 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 NUDT6P53370 316 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 UFM1P61960 85 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 RPL7AP62424 266 aaKnown RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 HMGN5P82970 282 aaKnown RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 MC1RQ01726 317 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 CREB5Q02930 508 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 EPS8Q12929 822 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 ITGADQ13349 1161 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 DCTN2Q13561 401 aaKnown RBP3.34□□□□□ -1.87
USP28-210ENST00000542033 PSMD6Q15008 389 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 ARHGEF6Q15052 776 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 ZNF284Q2VY69 593 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 ALDH1L2Q3SY69 923 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 FILIP1LQ4L180 1135 aa3.34□□□□□ -1.87
USP28-210ENST00000542033 SLC30A6Q6NXT4 461 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms