RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CWF19L1Q69YN2 538 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 HSDL2Q6YN16 418 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C17orf64Q86WR6 236 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ZNF579Q8NAF0 562 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 DENND6BQ8NEG7 585 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 OR52K1Q8NGK4 314 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ADAMTS15Q8TE58 950 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C12orf66Q96MD2 445 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 RBCK1Q9BYM8 510 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 VIPAS39Q9H9C1 493 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 MRM3Q9HC36 420 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 ZDHHC4Q9NPG8 344 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 COMMD9Q9P000 198 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 STK39Q9UEW8 545 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CLCA3PQ9Y6N3 262 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CFAP74Q9C0B2 1584 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 MYOCOSA0A1B0GUC4 107 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 WFS1O76024 890 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 CSN2P05814 226 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 NCK1P16333 377 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 PTNP21246 168 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CBLP22681 906 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 HK2P52789 917 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TLE2Q04725 743 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ZMYND11Q15326 602 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FAM98BQ52LJ0 330 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 N4BP2L1Q5TBK1 243 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 STOX1Q6ZVD7 989 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 THAP5Q7Z6K1 395 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ZNF410Q86VK4 478 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 UBQLNLQ8IYU4 475 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 KREMEN2Q8NCW0 462 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 OR52K2Q8NGK3 314 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 HTR3CQ8WXA8 447 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ITCHQ96J02 903 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 POLE3Q9NRF9 147 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FAM105AQ9NUU6 356 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 DDX18Q9NVP1 670 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 NCKIPSDQ9NZQ3 722 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 BTBD7Q9P203 1132 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 DKKL1Q9UK85 242 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SATB2Q9UPW6 733 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 NDUFAF1Q9Y375 327 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SMAD9O15198 467 aaKnown RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 PCDHGA12O60330 932 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 SDC3O75056 442 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 VIL1P09327 827 aaKnown RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 PON1P27169 355 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 OTX2P32243 289 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 TNFSF9P41273 254 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 HSPB3Q12988 150 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 SQLEQ14534 574 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 MEA1Q16626 185 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 PTPRNQ16849 979 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 KHDC1LQ5JSQ8 128 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 CXorf57Q6NSI4 855 aaKnown RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 FRRS1Q6ZNA5 592 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 SYDE1Q6ZW31 735 aaPredicted RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 MTDHQ86UE4 582 aaKnown RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 CEP295NLQ96MC4 621 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 RIC1Q4ADV7 1423 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 EFCAB10A6NFE3 127 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 BTN3A3O00478 584 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 DNALI1O14645 258 aaPredicted RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 RIPK2O43353 540 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 TMCC2O75069 709 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 CMPK1P30085 196 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 AXLP30530 894 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 DGKGP49619 791 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 CLCN7P51798 805 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 PLA2G16P53816 162 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 LSM3P62310 102 aaKnown RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 KCNJ2P63252 427 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 ZBTB6Q15916 424 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 ZIK1Q3SY52 487 aaPredicted RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 POTEAQ6S8J7 498 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 OR2AJ1Q8NGZ0 328 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 RMND5BQ96G75 393 aaPredicted RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 NSMCE2Q96MF7 247 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 MYCBPQ99417 103 aaPredicted RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 ZNF222Q9UK12 451 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 NAALADL1Q9UQQ1 740 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 ISPDA4D126 451 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 ARL5CA6NH57 179 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 GPR89AB7ZAQ6 455 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 E2F3O00716 465 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 B4GALT5O43286 388 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 TULP3O75386 442 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 CHRNGP07510 517 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 GPR89BP0CG08 455 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 CCDC166P0CW27 439 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 MECP2P51608 486 aaKnown RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 MCCD1P59942 119 aaPredicted RBP6.32□□□□□ -1.4
DMD-228ENST00000541735 HSF2Q03933 536 aa6.32□□□□□ -1.4
DMD-228ENST00000541735 NAB1Q13506 487 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms