RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CHRDQ9H2X0 955 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 C2orf42Q9NWW7 574 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 HEATR9A2RTY3 570 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 ATG13O75143 517 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 KRT15P19012 456 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 AP1S1P61966 158 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 MTAPQ13126 283 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 TRABD2AQ86V40 505 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 RASSF3Q86WH2 238 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 SRRM1Q8IYB3 904 aaKnown RBP27.9■■■□□ 2.06
CCM2-218ENST00000541586 PTPRN2Q92932 1015 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 SLC17A6Q9P2U8 582 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 ZNF180Q9UJW8 692 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 MMP17Q9ULZ9 603 aa27.9■■■□□ 2.06
CCM2-218ENST00000541586 TRAF2Q12933 501 aa27.89■■■□□ 2.06
CCM2-218ENST00000541586 HNRNPA1L2Q32P51 320 aaKnown RBP27.89■■■□□ 2.06
CCM2-218ENST00000541586 HSF5Q4G112 596 aaPredicted RBP27.89■■■□□ 2.06
CCM2-218ENST00000541586 C22orf39Q6P5X5 142 aa27.89■■■□□ 2.06
CCM2-218ENST00000541586 MARK2Q7KZI7 788 aaKnown RBP27.89■■■□□ 2.06
CCM2-218ENST00000541586 PDHA1P08559 390 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 CREB1P16220 341 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 CSNK1DP48730 415 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 VASPP50552 380 aaPredicted RBP27.89■■■□□ 2.05
CCM2-218ENST00000541586 NAB1Q13506 487 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 ENPP2Q13822 863 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 KIAA1211LQ6NV74 962 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 ESRP1Q6NXG1 681 aaKnown RBP27.89■■■□□ 2.05
CCM2-218ENST00000541586 TMEM92Q6UXU6 159 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 RYBPQ8N488 228 aaPredicted RBP27.89■■■□□ 2.05
CCM2-218ENST00000541586 ARFGAP2Q8N6H7 521 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 OR6K2Q8NGY2 324 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 MZB1Q8WU39 189 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 GABRG3Q99928 467 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 TREX1Q9NSU2 369 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 C20orf96Q9NUD7 363 aaPredicted RBP27.89■■■□□ 2.05
CCM2-218ENST00000541586 DLGAP2Q9P1A6 1054 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 ZFATQ9P243 1243 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 SLC2A6Q9UGQ3 507 aa27.89■■■□□ 2.05
CCM2-218ENST00000541586 EDDM13A0A1B0GTR0 161 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 CHURC1-FNTBB4DL54 471 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 SIN3BO75182 1162 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 STARD3Q14849 445 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 KCNMB4Q86W47 210 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 FBXL6Q8N531 539 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 ISG20Q96AZ6 181 aaKnown RBP27.88■■■□□ 2.05
CCM2-218ENST00000541586 CEP44Q9C0F1 390 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 EVLQ9UI08 416 aaPredicted RBP27.88■■■□□ 2.05
CCM2-218ENST00000541586 ACTL7BQ9Y614 415 aa27.88■■■□□ 2.05
CCM2-218ENST00000541586 IQANK1A0A1B0GTG1 560 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 IGSF6O95976 241 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PRKCGP05129 697 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 COL9A1P20849 921 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 RECQLP46063 649 aaPredicted RBP27.87■■■□□ 2.05
CCM2-218ENST00000541586 CRY1Q16526 586 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 HSP90AA5PQ58FG0 334 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 C9orf64Q5T6V5 341 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 SPEM1Q8N4L4 309 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 RMDN1Q96DB5 314 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PRSS16Q9NQE7 514 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 ANKRD36A6QL64 1941 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 A0A1W2PPM1 405 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 A0A1W2PQF6 199 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 MROH6A6NGR9 719 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PPARDQ03181 441 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 CNGA3Q16281 694 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 TSTD2Q5T7W7 516 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PDPK2PQ6A1A2 396 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 SYT13Q7L8C5 426 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 BMP8AQ7Z5Y6 402 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 STK40Q8N2I9 435 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PCDH20Q8N6Y1 951 aaKnown RBP27.87■■■□□ 2.05
CCM2-218ENST00000541586 TMEM105Q8N8V8 129 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 LPCAT1Q8NF37 534 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 OR2AP1Q8NGE2 309 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 BLOC1S5Q8TDH9 187 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PDCD6IPQ8WUM4 868 aaKnown RBP27.87■■■□□ 2.05
CCM2-218ENST00000541586 ADGRE3Q9BY15 652 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 SPATA6Q9NWH7 488 aaPredicted RBP27.87■■■□□ 2.05
CCM2-218ENST00000541586 PSAT1Q9Y617 370 aa27.87■■■□□ 2.05
CCM2-218ENST00000541586 PIRTP0C851 137 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 CA4P22748 312 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 MAPK8P45983 427 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 CARD16Q5EG05 197 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 DPY19L3Q6ZPD9 716 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 SELENOSQ9BQE4 189 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 SENP1Q9P0U3 644 aa27.86■■■□□ 2.05
CCM2-218ENST00000541586 LDB2O43679 373 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 FZD6O60353 706 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 VAPBO95292 243 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 PAPSS2O95340 614 aaPredicted RBP27.85■■■□□ 2.05
CCM2-218ENST00000541586 ARNTP27540 789 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 ARCN1P48444 511 aaKnown RBP27.85■■■□□ 2.05
CCM2-218ENST00000541586 SNRPD1P62314 119 aaKnown RBP27.85■■■□□ 2.05
CCM2-218ENST00000541586 TEDDM1Q5T9Z0 273 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 CACUL1Q86Y37 369 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 CAMK1DQ8IU85 385 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 OR2A12Q8NGT7 310 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 BRSK1Q8TDC3 778 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 AGAP2Q99490 1192 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 TRABDQ9H4I3 376 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms