RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 HSPA4LO95757 839 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 ADAP00813 363 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SERPINC1P01008 464 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 MBPP02686 304 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 CD63P08962 238 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 TMEM191BP0C7N4 346 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 IL11P20809 199 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 CHRNA5P30532 468 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 PTPN9P43378 593 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 GABRB2P47870 512 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 RPS13P62277 151 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 UBXN2AP68543 259 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 PLIN5Q00G26 463 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 ROR1Q01973 937 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 ID2Q02363 134 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 CYP4A11Q02928 519 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 CFHR1Q03591 330 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 NIPAL4Q0D2K0 466 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 GAB1Q13480 694 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 KPNB1Q14974 876 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 RBMS2Q15434 407 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 RAB41Q5JT25 222 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 C1orf141Q5JVX7 400 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 C1QTNF12Q5T7M4 302 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 DEF8Q6ZN54 512 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 UBE2Q1Q7Z7E8 422 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 FAM47BQ8NA70 645 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 POC5Q8NA72 575 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 MCUQ8NE86 351 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 PERPQ96FX8 193 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 VMP1Q96GC9 406 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 PGAM5Q96HS1 289 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 TEFMQ96QE5 360 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 BBS4Q96RK4 519 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 NUF2Q9BZD4 464 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 OR10A4Q9H209 315 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 GRPEL1Q9HAV7 217 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 GIMAP4Q9NUV9 329 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 TMEM184CQ9NVA4 438 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 TMEM248Q9NWD8 314 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SEMA5BQ9P283 1151 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SUCLA2Q9P2R7 463 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 DTX4Q9Y2E6 619 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 AAR2Q9Y312 384 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 FAM96BQ9Y3D0 163 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 MROH1Q8NDA8 1641 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 EIF2AK4Q9P2K8 1649 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 TET3O43151 1660 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SETD5Q9C0A6 1442 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 CACNA1IQ9P0X4 2223 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 TIAM1Q13009 1591 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 NWD1Q149M9 1564 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 TCRBV7S3A2A0A539 114 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 FRMD3A2A2Y4 597 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 TYW5A2RUC4 315 aaKnown RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 SH2B2O14492 632 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 LDLRAD4O15165 306 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 HS6ST1O60243 411 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 TLR2O60603 784 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 SLC25A12O75746 678 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 SEC31AO94979 1220 aaKnown RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 CTSAP10619 480 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 PCNAP12004 261 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 PRF1P14222 555 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 GARSP41250 739 aaKnown RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 SLC15A1P46059 708 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 NRIP1P48552 1158 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 ZBED6P86452 979 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 DMWDQ09019 674 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 STIM1Q13586 685 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 SLC9C1Q4G0N8 1177 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 AWAT2Q6E213 333 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 HMBOX1Q6NT76 420 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 C17orf99Q6UX52 265 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 MOB3CQ70IA8 216 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 DNAAF5Q86Y56 855 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 GALNT13Q8IUC8 556 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 NKAIN3Q8N8D7 197 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 NRACQ8N912 160 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 GSDMBQ8TAX9 411 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 FAM110DQ8TAY7 271 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 PIGKQ92643 395 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 C1orf74Q96LT6 269 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 WDFY2Q96P53 400 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 ADPGKQ9BRR6 497 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 KIF9Q9HAQ2 790 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 PFDN4Q9NQP4 134 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 CTNNAL1Q9UBT7 734 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 HSPB7Q9UBY9 170 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 SEC63Q9UGP8 760 aaKnown RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 FBXO40Q9UH90 709 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 FBXO4Q9UKT5 387 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 INTS6Q9UL03 887 aaKnown RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 CAPN7Q9Y6W3 813 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF644Q9H582 1327 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 ZMYM2Q9UBW7 1377 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms