RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KIAA0100Q14667 2235 aaKnown RBP17.25■□□□□ 0.35
SPIDR-227ENST00000541342 PRSS51A0A1B0GVH4 220 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 DRGXA6NNA5 263 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ACOT8O14734 319 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ACRP10323 421 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 NAGLUP54802 743 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ZC3HC1Q86WB0 502 aaKnown RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 FCRL5Q96RD9 977 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 FNIP2Q9P278 1114 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 RAB26Q9ULW5 256 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 CCDC78A2IDD5 438 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 J3KR12 359 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 TIMM44O43615 452 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 NDST2P52849 883 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 NADK2Q4G0N4 442 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 RBM44Q6ZP01 1051 aaKnown RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 EGFL6Q8IUX8 553 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 DGCR14Q96DF8 476 aaKnown RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 TMEM169Q96HH4 297 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 IL22Q9GZX6 179 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ZBTB26Q9HCK0 441 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 RBM22Q9NW64 420 aaKnown RBP eCLIP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ANAPC1Q9H1A4 1944 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ZNF840PA6NDX5 716 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 TMEM233B4DJY2 109 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 RPL5P46777 297 aaKnown RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 CSE1LP55060 971 aaKnown RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 BTG3Q14201 252 aaPredicted RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 PRPSAP1Q14558 356 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 C6orf52Q5T4I8 152 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 TIGD7Q6NT04 549 aaPredicted RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 MFSD6LQ8IWD5 586 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 PGAM4Q8N0Y7 254 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ARMC5Q96C12 935 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 ZNF512Q96ME7 567 aaPredicted RBP17.24■□□□□ 0.35
SPIDR-227ENST00000541342 WDR41Q9HAD4 459 aa17.24■□□□□ 0.35
SPIDR-227ENST00000541342 TCAF2A6NFQ2 919 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 INHBCP55103 352 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 PDCD2Q16342 344 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 RARS2Q5T160 578 aaKnown RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 TSTD2Q5T7W7 516 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 FBXO46Q6PJ61 603 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 TMEM126BQ8IUX1 230 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 FAM156AQ8NDB6 213 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 B4GALNT2Q8NHY0 566 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 KCTD4Q8WVF5 259 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 CNBD2Q96M20 576 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 CEP295NLQ96MC4 621 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 RPRD1AQ96P16 312 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 SERPINI1Q99574 410 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 HERC2P3Q9BVR0 1158 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 DNMT3LQ9UJW3 386 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 CFLARO15519 480 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 CLPTM1O96005 669 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 AVPR1AP37288 418 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 ZNF460Q14592 562 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 KLHDC10Q6PID8 442 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 TMEM102Q8N9M5 508 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 STYXQ8WUJ0 223 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 MPP4Q96JB8 637 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 LRGUKQ96M69 825 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 APPL1Q9UKG1 709 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 COPG1Q9Y678 874 aaKnown RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 A0A1B0GTW7 788 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 COCHO43405 550 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 BCAS2O75934 225 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 ENO3P13929 434 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 SAT1P21673 171 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 SLC6A4P31645 630 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 ATP5C1P36542 298 aaKnown RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 ANO4Q32M45 955 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 SPNS2Q8IVW8 549 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 FSTL5Q8N475 847 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 DRAXINQ8NBI3 349 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-227ENST00000541342 YIPF1Q9Y548 306 aa17.23■□□□□ 0.35
SPIDR-227ENST00000541342 SLC22A2O15244 555 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 ARSAP15289 507 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 CREB5Q02930 508 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 MYLK3Q32MK0 819 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 NAPEPLDQ6IQ20 393 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 ZFP1Q6P2D0 407 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 DNAJC1Q96KC8 554 aaKnown RBP17.22■□□□□ 0.35
SPIDR-227ENST00000541342 GPR78Q96P69 363 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 GRIP2Q9C0E4 1043 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 SUDS3Q9H7L9 328 aaPredicted RBP17.22■□□□□ 0.35
SPIDR-227ENST00000541342 ZNF696Q9H7X3 374 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 HSFX1Q9UBD0 423 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 AAR2Q9Y312 384 aaKnown RBP17.22■□□□□ 0.35
SPIDR-227ENST00000541342 AK5Q9Y6K8 562 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 DLX3O60479 287 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 ASLP04424 464 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 TACR2P21452 398 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 DNAJB2P25686 324 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 CDH17Q12864 832 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 APOFQ13790 326 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 TPGS2Q68CL5 300 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 DENND5AQ6IQ26 1287 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 ADCY4Q8NFM4 1077 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms