RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 SOBPA7XYQ1 873 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 BNIP3LO60238 219 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 MPOP05164 745 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CES1P23141 567 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 PSMA3P25788 255 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 WEE1P30291 646 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CDKN2DP55273 166 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 BST1Q10588 318 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 TAF1AQ15573 450 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CHI3L2Q15782 390 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 GAB4Q2WGN9 574 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 FASTKD1Q53R41 847 aaKnown RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ARMC3Q5W041 872 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 NAIF1Q69YI7 327 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 NLRP9Q7RTR0 991 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 RFWD2Q8NHY2 731 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 STYXQ8WUJ0 223 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CYB5D2Q8WUJ1 264 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 FGF13Q92913 245 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 MOCOSQ96EN8 888 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CCDC97Q96F63 343 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 GPR78Q96P69 363 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 SFXN1Q9H9B4 322 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 MARK1Q9P0L2 795 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 DCDC2Q9UHG0 476 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 FKBPLQ9UIM3 349 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 HS3ST2Q9Y278 367 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 USP15Q9Y4E8 981 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ANTXRLA6NF34 631 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 G3V2L1 256 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 CD3EAPO15446 510 aaKnown RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 HTRA2O43464 458 aaPredicted RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 ITM2AO43736 263 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 LYPLA1O75608 230 aaPredicted RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 CISD3P0C7P0 127 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 FCARP24071 287 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 GLRBP48167 497 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 AP1S1P61966 158 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 HYAL1Q12794 435 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 PEX6Q13608 980 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 EML3Q32P44 896 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 MBLAC2Q68D91 279 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 TMEM207Q6UWW9 146 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 KYAT3Q6YP21 454 aaKnown RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 GET4Q7L5D6 327 aaPredicted RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 KIAA0907Q7Z7F0 614 aaPredicted RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 PIM3Q86V86 326 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 NUDCD3Q8IVD9 361 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 SFTPA1Q8IWL2 248 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 PIANPQ8IYJ0 282 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 CELF5Q8N6W0 485 aaKnown RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 CCDC63Q8NA47 563 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 OR2AP1Q8NGE2 309 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 MRGPRX3Q96LB0 322 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 DUS2Q9NX74 493 aaKnown RBP12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 RIMKLBQ9ULI2 386 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 CRYL1Q9Y2S2 319 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 STARD13Q9Y3M8 1113 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 ZNF711Q9Y462 761 aa12.29□□□□□ -0.44
AP003559.1-201ENST00000540906 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 FSHRP23945 695 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 SLC6A11P48066 632 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 CSNK1DP48730 415 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 RAB10P61026 200 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 CDKN3Q16667 212 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 UGP2Q16851 508 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 INSCQ1MX18 579 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 ARMC12Q5T9G4 340 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 HECTD2Q5U5R9 776 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 PSAPL1Q6NUJ1 521 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 DPY19L3Q6ZPD9 716 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 KIAA0408Q6ZU52 694 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 Q6ZVU0 165 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 RAPH1Q70E73 1250 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 GPR150Q8NGU9 434 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 OR4L1Q8NH43 312 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 C10orf82Q8WW14 230 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 NXNL1Q96CM4 212 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 CABS1Q96KC9 395 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 ASB16Q96NS5 453 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 TSSK1BQ9BXA7 367 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 LMAN2LQ9H0V9 348 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 CATSPERZQ9NTU4 200 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 NUMBLQ9Y6R0 609 aa12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
AP003559.1-201ENST00000540906 A8MX80 341 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 TTC34A8MYJ7 566 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms