RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRAMEF1O95521 474 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 HLA-DRAP01903 254 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 RPLP0P05388 317 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ANXA6P08133 673 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 KRT7P08729 469 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CD58P19256 250 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ITIH1P19827 911 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 DCTP40126 519 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 PIK3CAP42336 1068 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 RECQLP46063 649 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ADKP55263 362 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 TBX4P57082 545 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 RPS21P63220 83 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CCL7P80098 99 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 SLC7A5Q01650 507 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 EIF2B5Q13144 721 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 PDE1CQ14123 709 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 FGL2Q14314 439 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 DLG2Q15700 870 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CLEC16AQ2KHT3 1053 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ACCSLQ4AC99 568 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 LACTB2Q53H82 288 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 DCAF6Q58WW2 860 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 FAM26FQ5R3K3 315 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 SEL1L3Q68CR1 1132 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CAPRIN2Q6IMN6 1127 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 KIAA1161Q6NSJ0 714 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CNNM4Q6P4Q7 775 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 LVRNQ6Q4G3 990 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 VHLLQ6RSH7 139 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 C6orf15Q6UXA7 325 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 MAMDC2Q7Z304 686 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 BRAPQ7Z569 592 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CREG2Q8IUH2 290 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 TP53INP2Q8IXH6 220 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 NELFCDQ8IXH7 590 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 SIX6OS1Q8N1H7 587 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CFAP52Q8N1V2 620 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 SDR16C5Q8N3Y7 309 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 TMIEQ8NEW7 156 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ASB11Q8WXH4 323 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ASB12Q8WXK4 309 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 IRGQQ8WZA9 623 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 MISP3Q96FF7 219 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 FAXDC2Q96IV6 333 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 PPP1R13BQ96KQ4 1090 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 FCRL2Q96LA5 508 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 LENG8Q96PV6 779 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CMKLR1Q99788 373 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 HDAC8Q9BY41 377 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 SLC17A9Q9BYT1 436 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CPEB1Q9BZB8 566 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 FOXP3Q9BZS1 431 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 IMPG2Q9BZV3 1241 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 TNMDQ9H2S6 317 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 LRRN3Q9H3W5 708 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 LRRC4Q9HBW1 653 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 APOBEC3GQ9HC16 384 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 CNGB3Q9NQW8 809 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 DYRK4Q9NR20 520 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 DMAC2Q9NW81 257 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 APOBEC3BQ9UH17 382 aaKnown RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 FBXO2Q9UK22 296 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-214ENST00000540865 VPS4AQ9UN37 437 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 NAALADL1Q9UQQ1 740 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 ZNF451Q9Y4E5 1061 aa4.69□□□□□ -1.66
SNHG1-214ENST00000540865 PDZD2O15018 2839 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 A1L4Q6 167 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 M0QYT0 321 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 TULP2O00295 520 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 KPNA3O00505 521 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-214ENST00000540865 RAD51BO15315 384 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 KLF4O43474 513 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 CNTN5O94779 1100 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 STK10O94804 968 aaKnown RBP4.68□□□□□ -1.66
SNHG1-214ENST00000540865 PAK4O96013 591 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-214ENST00000540865 ESR1P03372 595 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 CTSLP07711 333 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 LIFP15018 202 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 PDGFRAP16234 1089 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 GNLYP22749 145 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 CHRNA3P32297 505 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 ETV5P41161 510 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 UQCRFS1P47985 274 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 MAPK10P53779 464 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 RAD23BP54727 409 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 MLLT10P55197 1068 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 DAOAP59103 153 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 PFN3P60673 137 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 YPEL5P62699 121 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 DLG4P78352 724 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 AMPD3Q01432 767 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 ADIGQ0VDE8 80 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 BST2Q10589 180 aaKnown RBP4.68□□□□□ -1.66
SNHG1-214ENST00000540865 C1orf61Q13536 156 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 PTK2BQ14289 1009 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 KNOP1Q1ED39 458 aaKnown RBP4.68□□□□□ -1.66
SNHG1-214ENST00000540865 ERN2Q76MJ5 926 aaKnown RBP4.68□□□□□ -1.66
SNHG1-214ENST00000540865 THAP5Q7Z6K1 395 aa4.68□□□□□ -1.66
SNHG1-214ENST00000540865 TSPYL5Q86VY4 417 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms