RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ATXN7L1Q9ULK2 861 aaPredicted RBP16.31■□□□□ 0.2
TRIM65-203ENST00000540812 BOD1L1Q8NFC6 3051 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 CAPN8A6NHC0 703 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 TEX33O43247 280 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 DAPK3O43293 454 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 ELFN1P0C7U0 828 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 DESP17661 470 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 MIPP30301 263 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 CCKBRP32239 447 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 BCL2L1Q07817 233 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 EIF3IQ13347 325 aaKnown RBP16.3■□□□□ 0.2
TRIM65-203ENST00000540812 PPP6R3Q5H9R7 873 aaPredicted RBP16.3■□□□□ 0.2
TRIM65-203ENST00000540812 CERCAMQ5T4B2 595 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 OGFOD3Q6PK18 319 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 CCDC81Q6ZN84 652 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 DPPA4Q7L190 304 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 JAMLQ86YT9 394 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 FAM46DQ8NEK8 389 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 LGR4Q9BXB1 951 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
TRIM65-203ENST00000540812 RNF215Q9Y6U7 377 aa16.3■□□□□ 0.2
TRIM65-203ENST00000540812 TMEM191CA6NGB0 347 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 B4DGG1 531 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 TMX2-CTNND1H3BSU7 103 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 J3QKU1 62 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 HOXC4P09017 264 aaPredicted RBP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 TRIM23P36406 574 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 SCNN1BP51168 640 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 TYRO3Q06418 890 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 IL10RBQ08334 325 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 NSUN2Q08J23 767 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 DPYSQ14117 519 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 HLTFQ14527 1009 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 RFTN1Q14699 578 aaPredicted RBP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 TGIF1Q15583 401 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 OR6C4Q8NGE1 309 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 CCNL2Q96S94 520 aaPredicted RBP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
TRIM65-203ENST00000540812 CYP4F12Q9HCS2 524 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 B4GALT6Q9UBX8 382 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 PISDQ9UG56 409 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 APPL1Q9UKG1 709 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 LOXL2Q9Y4K0 774 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 PCDHGA7Q9Y5G6 932 aa16.29■□□□□ 0.2
TRIM65-203ENST00000540812 PYCARD-AS1I3L0S3 204 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 TNFRSF10CO14798 259 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 PRPSAP2O60256 369 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 CCDC172P0C7W6 258 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 GLB1P16278 677 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 ITIH1P19827 911 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
TRIM65-203ENST00000540812 SLC10A7Q0GE19 358 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 ACOX1Q15067 660 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
TRIM65-203ENST00000540812 C14orf28Q4W4Y0 310 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 E4F1Q66K89 784 aaPredicted RBP16.28■□□□□ 0.2
TRIM65-203ENST00000540812 SPECC1LQ69YQ0 1117 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 TMPRSS9Q7Z410 1059 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 SPRED1Q7Z699 444 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 AOPEPQ8N6M6 819 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 PAF1Q8N7H5 531 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 TMEM74Q96NL1 305 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 WDR26Q9H7D7 661 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 SUDS3Q9H7L9 328 aaPredicted RBP16.28■□□□□ 0.2
TRIM65-203ENST00000540812 CWC15Q9P013 229 aaKnown RBP16.28■□□□□ 0.2
TRIM65-203ENST00000540812 SEPT3Q9UH03 358 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 MOSPD1Q9UJG1 213 aa16.28■□□□□ 0.2
TRIM65-203ENST00000540812 ARHGEF17Q96PE2 2063 aaPredicted RBP16.27■□□□□ 0.2
TRIM65-203ENST00000540812 LRRC53A6NM62 1247 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 LRCH4O75427 683 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 KELP23276 732 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 ETV5P41161 510 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 AP1S1P61966 158 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 LBRQ14739 615 aaKnown RBP16.27■□□□□ 0.2
TRIM65-203ENST00000540812 CNGA3Q16281 694 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 ASIC2Q16515 512 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 PNCKQ6P2M8 343 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 ZNF571Q7Z3V5 609 aaPredicted RBP16.27■□□□□ 0.2
TRIM65-203ENST00000540812 PGBD5Q8N414 524 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 MED8Q96G25 268 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 COQ10AQ96MF6 247 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 PSKH2Q96QS6 385 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 NAT10Q9H0A0 1025 aaKnown RBP16.27■□□□□ 0.2
TRIM65-203ENST00000540812 DPEP2Q9H4A9 486 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 ETNK2Q9NVF9 386 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 LRIT1Q9P2V4 623 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 CNOT8Q9UFF9 292 aaKnown RBP16.27■□□□□ 0.2
TRIM65-203ENST00000540812 ACSL6Q9UKU0 697 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 MYO6Q9UM54 1294 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
TRIM65-203ENST00000540812 SCN8AQ9UQD0 1980 aa16.27■□□□□ 0.19
TRIM65-203ENST00000540812 PRSS38A1L453 326 aa16.26■□□□□ 0.19
TRIM65-203ENST00000540812 B8ZZF3 427 aa16.26■□□□□ 0.19
TRIM65-203ENST00000540812 DDX3XO00571 662 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRIM65-203ENST00000540812 HTRA2O43464 458 aaPredicted RBP16.26■□□□□ 0.19
TRIM65-203ENST00000540812 RNF8O76064 485 aa16.26■□□□□ 0.19
TRIM65-203ENST00000540812 PEX11BO96011 259 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms