RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SNX15	Q9NRS6	342 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DDIT4	Q9NX09	232 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GDE1	Q9NZC3	331 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SFMBT1	Q9UHJ3	866 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDC14A	Q9UNH5	594 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DOCK3	Q8IZD9	2030 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TTC36	A6NLP5	189 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMEM233	B4DJY2	109 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C5orf67	F2Z3F1	127 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLIC3	O95833	236 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MOCS2	O96007	188 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATP5B	P06576	529 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IRF1	P10914	325 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF26	P17031	533 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPL17	P18621	184 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MX2	P20592	715 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ME2	P23368	584 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CYP2F1	P24903	491 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDH5	P33151	784 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SOX11	P35716	441 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF143	P52747	638 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CTBS	Q01459	385 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SULT2A1	Q06520	285 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF177	Q13360	481 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SOWAHA	Q2M3V2	549 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCDC14	Q49A88	953 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PIGG	Q5H8A4	983 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PITRM1	Q5JRX3	1037 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IL31	Q6EBC2	164 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC8B1	Q6J4K2	584 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OGFOD2	Q6N063	350 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PATL1	Q86TB9	770 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PIGZ	Q86VD9	579 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TICAM1	Q8IUC6	712 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ERI1	Q8IV48	349 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SCUBE3	Q8IX30	993 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMEM102	Q8N9M5	508 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SMYD1	Q8NB12	490 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC4A11	Q8NBS3	891 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GANC	Q8TET4	914 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MYLIP	Q8WY64	445 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDKL2	Q92772	493 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF689	Q96CS4	500 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OTUB2	Q96DC9	234 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PABPC5	Q96DU9	382 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CNPY3	Q9BT09	278 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	B3GNT5	Q9BYG0	378 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SUDS3	Q9H7L9	328 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UBE2Z	Q9H832	354 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NOL11	Q9H8H0	719 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SYBU	Q9NX95	663 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IGSF9	Q9P2J2	1179 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PAIP2B	Q9ULR5	123 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IRAK3	Q9Y616	596 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RBBP6	Q7Z6E9	1792 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLASP2	O75122	1294 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MT-CO1	P00395	513 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCDC130	P13994	396 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ADIG	Q0VDE8	80 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NME3	Q13232	169 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDH18	Q13634	790 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATP1A4	Q13733	1029 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BOLA3	Q53S33	107 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RWDD4	Q6NW29	188 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C16orf89	Q6UX73	402 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TIFAB	Q6ZNK6	161 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MIB1	Q86YT6	1006 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PYROXD2	Q8N2H3	581 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CELF5	Q8N6W0	485 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM47B	Q8NA70	645 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FNIP1	Q8TF40	1166 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AUTS2	Q8WXX7	1259 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LZIC	Q8WZA0	190 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZMAT2	Q96NC0	199 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NELL2	Q99435	816 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	APOL2	Q9BQE5	337 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LPIN3	Q9BQK8	851 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ULBP1	Q9BZM6	244 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CWH43	Q9H720	699 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SELENON	Q9NZV5	590 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		A0A096LPK6	155 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SAC3D1	A6NKF1	404 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C2CD4B	A6NLJ0	364 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KCNU1	A8MYU2	1149 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TK2	O00142	265 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MAN2B1	O00754	1011 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PER2	O15055	1255 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PAPSS1	O43252	624 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TPST1	O60507	370 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TLR5	O60602	858 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	VAPB	O95292	243 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PIGN	O95427	931 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	H6PD	O95479	791 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HMBS	P08397	361 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GNAO1	P09471	354 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GLDC	P23378	1020 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NOS2	P35228	1153 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPD2	P43304	727 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RXRG	P48443	463 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms