RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 LRRC38Q5VT99 294 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 ENPP7Q6UWV6 458 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 USP45Q70EL2 814 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 VSIG1Q86XK7 387 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 RHOT1Q8IXI2 618 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 RBFAQ8N0V3 343 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 FSTL5Q8N475 847 aaPredicted RBP17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 TC2NQ8N9U0 490 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 MAML1Q92585 1016 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 DDX56Q9NY93 547 aaKnown RBP17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 SALL4Q9UJQ4 1053 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 DOLKQ9UPQ8 538 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 RAXQ9Y2V3 346 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 TTLL3Q9Y4R7 772 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 ITPR1Q14643 2758 aa17.21■□□□□ 0.35
CACNA2D4-211ENST00000540728 APOL1O14791 398 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 SPOPO43791 374 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 RASGRP1O95267 797 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 PGLSO95336 258 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 KRT1P04264 644 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 TNNT1P13805 278 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 ZFXP17010 805 aaPredicted RBP17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 KELP23276 732 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 CYLC1P35663 651 aaPredicted RBP17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 GBE1Q04446 702 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 DEFB133Q30KQ1 61 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 RD3Q7Z3Z2 195 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 HID1Q8IV36 788 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 CCDC13Q8IYE1 715 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 CCDC170Q8IYT3 715 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 SCG3Q8WXD2 468 aaKnown RBP17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 HDAC11Q96DB2 347 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 SCRN2Q96FV2 425 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 WDR92Q96MX6 357 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 DTLQ9NZJ0 730 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 KLQ9UEF7 1012 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 LHX6Q9UPM6 363 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 OR1A2Q9Y585 309 aa17.2■□□□□ 0.34
CACNA2D4-211ENST00000540728 LMO7DNF2Z398 122 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 PSMD11O00231 422 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 PDE2AO00408 941 aaPredicted RBP17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 HEXIM1O94992 359 aaKnown RBP17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 CAPNS1P04632 268 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 GP1BAP07359 652 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 ALPIP09923 528 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 RPIAP49247 311 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 ZNF75DP51815 510 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 HK3P52790 923 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 EPHB1P54762 984 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 SRP54P61011 504 aaKnown RBP17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 C1orf61Q13536 156 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 CAMK2BQ13554 666 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 ELOCQ15369 112 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 CNGA3Q16281 694 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 DENND2CQ68D51 928 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 RFX6Q8HWS3 928 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 SDR16C5Q8N3Y7 309 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 PLA2G15Q8NCC3 412 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 TPCN2Q8NHX9 752 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 TSACCQ96A04 125 aaPredicted RBP17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 NUS1Q96E22 293 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 MRFAP1L1Q96HT8 127 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 LRRC61Q9BV99 259 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 ABCG4Q9H172 646 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 TCEAL2Q9H3H9 227 aaPredicted RBP17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 CLCA2Q9UQC9 943 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 HEY1Q9Y5J3 304 aa17.19■□□□□ 0.34
CACNA2D4-211ENST00000540728 GCATO75600 419 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 IPO7O95373 1038 aaKnown RBP17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 TNFP01375 233 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 HOXC4P09017 264 aaPredicted RBP17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 TSHRP16473 764 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 KIAA1024LP59773 190 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 SLC10A2Q12908 348 aaPredicted RBP17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 TARDBPQ13148 414 aaKnown RBP eCLIP17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 PDK1Q15118 436 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 NR0B2Q15466 257 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 ALG11Q2TAA5 492 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 ALG1LQ6GMV1 187 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 ESRP1Q6NXG1 681 aaKnown RBP17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 PNCKQ6P2M8 343 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 C19orf48Q6RUI8 117 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 CACTIN-AS1Q8N1I8 211 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 PLD5Q8N7P1 536 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 RNF25Q96BH1 459 aaPredicted RBP17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 COQ10AQ96MF6 247 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 RBSNQ9H1K0 784 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 WDR26Q9H7D7 661 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 PPIL1Q9Y3C6 166 aa17.18■□□□□ 0.34
CACNA2D4-211ENST00000540728 CPED1A4D0V7 1026 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 PPP1R12AO14974 1030 aaPredicted RBP17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 YY2O15391 372 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 LCA5LO95447 670 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 JCHAINP01591 159 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 HLA-DQB2P05538 268 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 MYF5P13349 255 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 CTPS1P17812 591 aa17.17■□□□□ 0.34
CACNA2D4-211ENST00000540728 COMTP21964 271 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms