RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ANKRD36A6QL64 1941 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 PI4KAP42356 2102 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 FAM221BA6H8Z2 402 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 STK10O94804 968 aaKnown RBP16.78■□□□□ 0.28
UBC-208ENST00000540700 KRT14P02533 472 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 CAPNS1P04632 268 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 CES1P23141 567 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 ADRA1AP35348 466 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 DPP6P42658 865 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 CHRNA4P43681 627 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 VPS41P49754 854 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 NEK3P51956 506 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 GALNT3Q14435 633 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 SPARCL1Q14515 664 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 GRM3Q14832 879 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 SLC14A2Q15849 920 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 UGP2Q16851 508 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 TTC31Q49AM3 519 aaPredicted RBP16.78■□□□□ 0.28
UBC-208ENST00000540700 ITPRIPL1Q6GPH6 555 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 GSTA5Q7RTV2 222 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 RAB44Q7Z6P3 723 aaPredicted RBP16.78■□□□□ 0.28
UBC-208ENST00000540700 PNPLA1Q8N8W4 532 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 CEP76Q8TAP6 659 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 GANCQ8TET4 914 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 OMDQ99983 421 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 PCDH9Q9HC56 1237 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 PCDH12Q9NPG4 1184 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 FZD4Q9ULV1 537 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 FADS3Q9Y5Q0 445 aa16.78■□□□□ 0.28
UBC-208ENST00000540700 LOC285095A0A1B0GVY8 99 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 TCRBV7S3A2A0A539 114 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 CCDC188H7C350 402 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 AREL1O15033 823 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 PLRG1O43660 514 aaKnown RBP16.77■□□□□ 0.28
UBC-208ENST00000540700 ZNF189O75820 626 aaPredicted RBP16.77■□□□□ 0.28
UBC-208ENST00000540700 CPP00450 1065 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 AGTP01019 485 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 CD59P13987 128 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 CTPS1P17812 591 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 PPP2CBP62714 309 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 PPP2CAP67775 309 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 RALGDSQ12967 914 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 QPCTQ16769 361 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 ARMC12Q5T9G4 340 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 LRRN4CLQ8ND94 238 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 LPCAT1Q8NF37 534 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 IPMKQ8NFU5 416 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 HCAR2Q8TDS4 363 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 SLCO2A1Q92959 643 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 PPP1R16AQ96I34 528 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 FERMT1Q9BQL6 677 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 TRIM51Q9BSJ1 452 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 C6orf106Q9H6K1 298 aaPredicted RBP16.77■□□□□ 0.28
UBC-208ENST00000540700 PAK5Q9P286 719 aa16.77■□□□□ 0.28
UBC-208ENST00000540700 TTI1O43156 1089 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 SH3BP5O60239 455 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 USP12O75317 370 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 ZNF217O75362 1048 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 ECEL1O95672 775 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 ALPIP09923 528 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 CD6P30203 668 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 TERF1P54274 439 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 CDK18Q07002 472 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 MPP3Q13368 585 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 SEMA5AQ13591 1074 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 TRIP6Q15654 476 aaKnown RBP16.76■□□□□ 0.27
UBC-208ENST00000540700 SPDYCQ5MJ68 293 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 PEAR1Q5VY43 1037 aaPredicted RBP16.76■□□□□ 0.27
UBC-208ENST00000540700 DENND5AQ6IQ26 1287 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 BRAT1Q6PJG6 821 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 TTC7BQ86TV6 843 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 PDCD7Q8N8D1 485 aaKnown RBP16.76■□□□□ 0.27
UBC-208ENST00000540700 OR14C36Q8NHC7 312 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 HNRNPLLQ8WVV9 542 aaKnown RBP16.76■□□□□ 0.27
UBC-208ENST00000540700 APOL2Q9BQE5 337 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 FICDQ9BVA6 458 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 CCDC86Q9H6F5 360 aaKnown RBP16.76■□□□□ 0.27
UBC-208ENST00000540700 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 DYRK4Q9NR20 520 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 RAB6BQ9NRW1 208 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 HAUS2Q9NVX0 235 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 B4GALT6Q9UBX8 382 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 ZFR2Q9UPR6 939 aaKnown RBP16.76■□□□□ 0.27
UBC-208ENST00000540700 PPIL1Q9Y3C6 166 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 ASXL3Q9C0F0 2248 aa16.76■□□□□ 0.27
UBC-208ENST00000540700 BPTFQ12830 3046 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 NUMA1Q14980 2115 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 PLXND1Q9Y4D7 1925 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 NPIPB15A6NHN6 443 aaPredicted RBP16.75■□□□□ 0.27
UBC-208ENST00000540700 A8MX80 341 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 ARHGAP33O14559 1287 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
UBC-208ENST00000540700 SLC7A4O43246 635 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 RAD51CO43502 376 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 GM2AP17900 193 aa16.75■□□□□ 0.27
UBC-208ENST00000540700 LHCGRP22888 699 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms