RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 VPS28Q9UK41 221 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 TCAF1Q9Y4C2 921 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 ANKRD33BA6NCL7 494 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 SAGE2PA6NJ88 616 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 IFRD1O00458 451 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-203ENST00000540357 IFNA8P32881 189 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 BAG6P46379 1132 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 MBTD1Q05BQ5 628 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 HSDL1Q3SXM5 330 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 KLHL3Q9UH77 587 aa13.05□□□□□ -0.32
DNMT1-203ENST00000540357 RECQL4O94761 1208 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 BNIP3Q12983 259 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 TUBA3CQ13748 450 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 EML3Q32P44 896 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 TTLL9Q3SXZ7 439 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 PIGGQ5H8A4 983 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 ZNF549Q6P9A3 640 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 KLHL35Q6PF15 583 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 GPSM1Q86YR5 675 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 ZNF540Q8NDQ6 660 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 SLC47A1Q96FL8 570 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 FEM1CQ96JP0 617 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 RPRD1AQ96P16 312 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 GPR22Q99680 433 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 FZD8Q9H461 694 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 PTPRHQ9HD43 1115 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 GMPPBQ9Y5P6 360 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 COL22A1Q8NFW1 1626 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 ZNF197O14709 1029 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 IDH3BO43837 385 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 SERPINF2P08697 491 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 ARF4P18085 180 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 DGKZQ13574 1117 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 NEK10Q6ZWH5 1172 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 ZUFSPQ96AP4 578 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 NUDT5Q9UKK9 219 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 PDE10AQ9Y233 779 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 DGKBQ9Y6T7 804 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 EI24O14681 340 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 SNPHO15079 494 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 DYNC1LI2O43237 492 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 UGT2B11O75310 529 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 RNASEH2AO75792 299 aaKnown RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 GJB1P08034 283 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 FGFR1P11362 822 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 MTHFRP42898 656 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 POLR2JP52435 117 aaKnown RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 CDH13P55290 713 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 LSM3P62310 102 aaKnown RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 JAG1P78504 1218 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 NIPAL4Q0D2K0 466 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 GRM2Q14416 872 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 PGS1Q32NB8 556 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 MILR1Q7Z6M3 343 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 KRT73Q86Y46 540 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 MOV10Q9HCE1 1003 aaKnown RBP13.04□□□□□ -0.32
DNMT1-203ENST00000540357 PSAT1Q9Y617 370 aa13.04□□□□□ -0.32
DNMT1-203ENST00000540357 GPR25O00155 361 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 LGALS2P05162 132 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 HMBSP08397 361 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 C7P10643 843 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PORP16435 677 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-203ENST00000540357 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 CEACAM7Q14002 265 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PAGE2BQ5JRK9 111 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 DEPDC1Q5TB30 811 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 SVOPLQ8N434 492 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 SERPINB11Q96P15 392 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TWNKQ96RR1 684 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 OSMRQ99650 979 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PSME2Q9UL46 239 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 MYH11P35749 1972 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 DLX3O60479 287 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PCNAP12004 261 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 SULT2A1Q06520 285 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 FOXM1Q08050 763 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ASIC4Q96FT7 647 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PPP3R2Q96LZ3 170 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TUBA1CQ9BQE3 449 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 SLC13A4Q9UKG4 626 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TMED5Q9Y3A6 229 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 UBXN8O00124 270 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 KRT6AP02538 564 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 KRT6BP04259 564 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms