RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 TNFP01375 233 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 TPM1P09493 284 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 GOLGA6DP0CG33 693 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 CTPS1P17812 591 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 GM2AP17900 193 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 CR2P20023 1033 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 ITPKBP27987 946 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 VIPR1P32241 457 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 ABCG1P45844 678 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 GABREP78334 506 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 TRIM14Q14142 442 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 MESDQ14696 234 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 CNGA3Q16281 694 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 ANKRD20A8PQ5CZ79 823 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 ARMC12Q5T9G4 340 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 NCBP2-AS2Q69YL0 99 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 LRRC69Q6ZNQ3 347 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 GKN2Q86XP6 184 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 PELI3Q8N2H9 469 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 OR56A4Q8NGH8 313 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 OR1E3Q8WZA6 343 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 NUS1Q96E22 293 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 CCDC3Q9BQI4 270 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 WDR26Q9H7D7 661 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 MRPL40Q9NQ50 206 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 GOLGA6AQ9NYA3 693 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 GPR34Q9UPC5 381 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 SHROOM3Q8TF72 1996 aa12.78□□□□□ -0.36
TSPAN9-IT1-201ENST00000539784 A0A087WV48 116 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 A0A0U1RQS6 177 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 A0A1W2PQ67 120 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NPIPB15A6NHN6 443 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RRP8O43159 456 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PGLSO95336 258 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CYP2A6P11509 494 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NFKBIAP25963 317 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ACTN2P35609 894 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 EIF2S3P41091 472 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 GARSP41250 739 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ARSEP51690 589 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KIAA1024LP59773 190 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 C3orf38Q5JPI3 329 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PNCKQ6P2M8 343 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HSD11B1LQ7Z5J1 315 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TSPAN33Q86UF1 283 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ARL10Q8N8L6 244 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NAT6Q93015 286 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 COQ10AQ96MF6 247 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 DNAJC7Q99615 494 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LGR4Q9BXB1 951 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CYP4F12Q9HCS2 524 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FGF22Q9HCT0 170 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PHTF1Q9UMS5 762 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 B4DGG1 531 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PDHA1P08559 390 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KRT7P08729 469 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LHCGRP22888 699 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KELP23276 732 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ETV3P41162 512 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 DSC2Q02487 901 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 GBE1Q04446 702 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 GALNT2Q10471 571 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ARHGEF7Q14155 803 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SPIDRQ14159 915 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PAFAH1B3Q15102 231 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PDK2Q15119 407 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TIGD7Q6NT04 549 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RBM44Q6ZP01 1051 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 USP45Q70EL2 814 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 VSTM4Q8IW00 320 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MAP7D3Q8IWC1 876 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCNYQ8ND76 341 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TPCN2Q8NHX9 752 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FGF11Q92914 225 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCDC74AQ96AQ1 378 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SMIM14Q96QK8 99 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CHP1Q99653 195 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms