RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KLHL23Q8NBE8 558 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MRPL45Q9BRJ2 306 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CDH19Q9H159 772 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RHBGQ9H310 441 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MUC13Q9H3R2 512 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RHOJQ9H4E5 214 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PCDHGC3Q9UN70 934 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ERGIC3Q9Y282 383 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MYH9P35579 1960 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 FAM237BA0A1B0GVD1 139 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 C5orf60A6NFR6 353 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MOXD2PA6NHM9 499 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PEX11AO75192 247 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PAGE1O75459 146 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PGK1P00558 417 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CST1P01037 141 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MAPKAPK2P49137 400 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TUSC3Q13454 348 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 DEFB115Q30KQ5 88 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 KLHL12Q53G59 568 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CRELD2Q6UXH1 353 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RASGEF1CQ8N431 466 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 OR5B17Q8NGF7 314 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 OR4A15Q8NGL6 344 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SNRNP27Q8WVK2 155 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 S100ZQ8WXG8 99 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RTKNQ9BST9 563 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 C3orf14Q9HBI5 128 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SLC27A5Q9Y2P5 690 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 COQ6Q9Y2Z9 468 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RWDD3Q9Y3V2 267 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ATXN2Q99700 1313 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 UGT1A5P35504 534 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CXCR3P49682 368 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RPL7AP62424 266 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 KLHL35Q6PF15 583 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 LCLAT1Q6UWP7 414 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RINLQ6ZS11 566 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 OFCC1Q8IZS5 231 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 DNAJB14Q8TBM8 379 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 KCTD4Q8WVF5 259 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ZFP14Q9HCL3 533 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 FBXO5Q9UKT4 447 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 VWA7Q9Y334 891 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PCDHA2Q9Y5H9 948 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 AZIN1O14977 448 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PER2O15055 1255 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RPP40O75818 363 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MYL9P24844 172 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ABRQ12979 859 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CBX2Q14781 532 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GPR180Q86V85 440 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RNF148Q8N7C7 305 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 UXS1Q8NBZ7 420 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 OR7A2PQ8NGA2 310 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TEX47Q8TBZ9 253 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TTPALQ9BTX7 342 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GBA3Q9H227 469 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 KLHL31Q9H511 634 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ZFYVE1Q9HBF4 777 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PCDH18Q9HCL0 1135 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 EXD2Q9NVH0 621 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 HES2Q9Y543 173 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 COLEC10Q9Y6Z7 277 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SLC28A2O43868 658 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DNTTP04053 509 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MMP8P22894 467 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GPD2P43304 727 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ASMTP46597 345 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TAS2R41P59536 307 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SPIBQ01892 262 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CDK18Q07002 472 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 LPPQ93052 612 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 P2RY11Q96G91 374 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 OR52E6Q96RD3 313 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 COPS8Q99627 209 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TBC1D10AQ9BXI6 508 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 NIFKQ9BYG3 293 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PIGUQ9H490 435 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 YDJCA8MPS7 323 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SLC25A14O95258 325 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 LAG3P18627 525 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CDH5P33151 784 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GSSP48637 474 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 RPL38P63173 70 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 RFTN2Q52LD8 501 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 UBE2R2Q712K3 238 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MARK2Q7KZI7 788 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 RAVER1Q8IY67 606 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SLC47A1Q96FL8 570 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 FCRL2Q96LA5 508 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SEMA6AQ9H2E6 1030 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 LYVE1Q9Y5Y7 322 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 RBM47A0AV96 593 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DHRS12A0PJE2 317 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms