RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CA4P22748 312 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 ADRA1AP35348 466 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 ABL2P42684 1182 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 CDK18Q07002 472 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 CNTN1Q12860 1018 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 GALNT3Q14435 633 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 TTC31Q49AM3 519 aaPredicted RBP17.3■□□□□ 0.36
CLN6-202ENST00000538696 KDELC2Q7Z4H8 507 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 PALM2Q8IXS6 379 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 GOLGA6L1Q8N7Z2 621 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 LPCAT1Q8NF37 534 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 HCAR2Q8TDS4 363 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 PIH1D2Q8WWB5 315 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 SPOCK2Q92563 424 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 FAM131CQ96AQ9 280 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 LRRC39Q96DD0 335 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 TBL1YQ9BQ87 522 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 TRIM56Q9BRZ2 755 aaKnown RBP17.3■□□□□ 0.36
CLN6-202ENST00000538696 DYRK4Q9NR20 520 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 USP36Q9P275 1121 aaKnown RBP17.3■□□□□ 0.36
CLN6-202ENST00000538696 SCML1Q9UN30 329 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 PCDHB9Q9Y5E1 797 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 MAD1L1Q9Y6D9 718 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 A0A0C4DFX4 3053 aa17.3■□□□□ 0.36
CLN6-202ENST00000538696 SCN8AQ9UQD0 1980 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 LOC285095A0A1B0GVY8 99 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 UPK3BL1B0FP48 263 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 GOLGA8KD6RF30 607 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 UPK3BL2E5RIL1 263 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 SPINT1O43278 529 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 AGTP01019 485 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 PRKCGP05129 697 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 ATXN1LP0C7T5 689 aaKnown RBP17.29■□□□□ 0.36
CLN6-202ENST00000538696 MYZAPP0CAP1 466 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 ACADMP11310 421 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 TIMP2P16035 220 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 P2RY2P41231 377 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 SLCO1A2P46721 670 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 NEK3P51956 506 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 CRADDP78560 199 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 STAT4Q14765 748 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 LONRF1Q17RB8 773 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 LRRC73Q5JTD7 316 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 TMEM31Q5JXX7 168 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 PIP5KL1Q5T9C9 394 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 AGBL4Q5VU57 503 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 NAPEPLDQ6IQ20 393 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 BRAT1Q6PJG6 821 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 ERN2Q76MJ5 926 aaKnown RBP17.29■□□□□ 0.36
CLN6-202ENST00000538696 HDDC3Q8N4P3 179 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 IFT43Q96FT9 208 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 SMIM14Q96QK8 99 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 EBNA1BP2Q99848 306 aaKnown RBP17.29■□□□□ 0.36
CLN6-202ENST00000538696 FSD1LQ9BXM9 530 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 HDAC8Q9BY41 377 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 FBXL12Q9NXK8 326 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 ZC3H7BQ9UGR2 993 aaKnown RBP17.29■□□□□ 0.36
CLN6-202ENST00000538696 CEP192Q8TEP8 1941 aa17.29■□□□□ 0.36
CLN6-202ENST00000538696 A0A1W2PQ67 120 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 TLDC2A0PJX2 215 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 SDR42E2A6NKP2 422 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 RASGRF2O14827 1237 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 RNASEH2AO75792 299 aaKnown RBP17.28■□□□□ 0.36
CLN6-202ENST00000538696 NDST3O95803 873 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 ADRB3P13945 408 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 HOXA6P31267 233 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 PHBP35232 272 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 CHRNA4P43681 627 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 TPMTP51580 245 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 EFTUD2Q15029 972 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLN6-202ENST00000538696 QPCTQ16769 361 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 UNC5AQ6ZN44 842 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 C3orf62Q6ZUJ4 267 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 USP30Q70CQ3 517 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 PAF1Q8N7H5 531 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 FBF1Q8TES7 1133 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 GANCQ8TET4 914 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 OMDQ99983 421 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 CENPHQ9H3R5 247 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 ITM2CQ9NQX7 267 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 RABGEF1Q9UJ41 708 aa17.28■□□□□ 0.36
CLN6-202ENST00000538696 ARIH1Q9Y4X5 557 aaPredicted RBP17.28■□□□□ 0.36
CLN6-202ENST00000538696 GOLGA6L10A6NI86 522 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 AXIN1O15169 862 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 TCEA3O75764 348 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 EPOP01588 193 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 IGLV3-19P01714 112 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 GRIA4P48058 902 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 FNTBP49356 437 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 RPL26P61254 145 aaKnown RBP17.27■□□□□ 0.36
CLN6-202ENST00000538696 CSTF1Q05048 431 aaKnown RBP17.27■□□□□ 0.36
CLN6-202ENST00000538696 UGP2Q16851 508 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 SIRPB2Q5JXA9 342 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 AGBL2Q5U5Z8 902 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 STEAP4Q687X5 459 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 DENND5AQ6IQ26 1287 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 FBXL19Q6PCT2 694 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 RANBP10Q6VN20 620 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms