RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 IGSF8Q969P0 613 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 TRIM8Q9BZR9 551 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 UTP6Q9NYH9 597 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 ANKRD12Q6UB98 2062 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 GPR182O15218 404 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 RBP1P09455 135 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 RPL5P46777 297 aaKnown RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 RENBPP51606 427 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SLC7A2P52569 658 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SH3BP2P78314 561 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 YWHAHQ04917 246 aaPredicted RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 MGAT3Q09327 533 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 EFEMP1Q12805 493 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 TUSC3Q13454 348 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SEMA3AQ14563 771 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 CYTH1Q15438 398 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 MYLK3Q32MK0 819 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 UNC50Q53HI1 259 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 MS4A13Q5J8X5 152 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF678Q5SXM1 525 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF549Q6P9A3 640 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 RETREG3Q86VR2 466 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 STON2Q8WXE9 905 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 MYEOVQ96EZ4 313 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 NSUN5Q96P11 429 aaKnown RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 KCNA7Q96RP8 456 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 CIB1Q99828 191 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SP110Q9HB58 689 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 ARNT2Q9HBZ2 717 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 RGS18Q9NS28 235 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 EPS15L1Q9UBC2 864 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 ACTL7AQ9Y615 435 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 DOCK4Q8N1I0 1966 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 A0A1B0GTL3 188 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 RTN3O95197 1032 aaPredicted RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 IMPDH1P20839 514 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 CALRP27797 417 aaKnown RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 TIAL1Q01085 375 aaKnown RBP eCLIP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 LARP4Q71RC2 724 aaKnown RBP eCLIP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SERINC5Q86VE9 423 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF280BQ86YH2 543 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 MYO1HQ8N1T3 1032 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 CALML6Q8TD86 181 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 BLOC1S5Q8TDH9 187 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 MPP4Q96JB8 637 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 AKTIPQ9H8T0 292 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SPAG4Q9NPE6 437 aa11.99□□□□□ -0.49
CPNE8-203ENST00000538596 POLR3BQ9NW08 1133 aaPredicted RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SUCOQ9UBS9 1254 aaKnown RBP11.99□□□□□ -0.49
CPNE8-203ENST00000538596 SMIM31A0A1B0GVY4 71 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 MROH6A6NGR9 719 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF839A8K0R7 811 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 UBXN8O00124 270 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 MUSKO15146 869 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 LDB2O43679 373 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 NRP2O60462 931 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CAPNS1P04632 268 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 FAM58BPP0C7Q3 252 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 RHDQ02161 417 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 GALNT3Q14435 633 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 RAP1GAP2Q684P5 730 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 HMBOX1Q6NT76 420 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 KLHDC10Q6PID8 442 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 TMEM126BQ8IUX1 230 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF683Q8IZ20 524 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CATSPER1Q8NEC5 780 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 KLHDC9Q8NEP7 349 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 OR13C4Q8NGS5 318 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ZFP28Q8NHY6 868 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 SERPINB11Q96P15 392 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 MTG1Q9BT17 334 aaPredicted RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 TRIM62Q9BVG3 475 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 VPS45Q9NRW7 570 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 GMIPQ9P107 970 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CD300AQ9UGN4 299 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 RNF11Q9Y3C5 154 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 DNAJC15Q9Y5T4 150 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 SCN10AQ9Y5Y9 1956 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 A0A0U1RQF3 1178 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 TIPRLO75663 272 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 TNFAIP8O95379 198 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 WISP3O95389 354 aaPredicted RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 C8BP07358 591 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ATXN1LP0C7T5 689 aaKnown RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 AKR1A1P14550 325 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CKMT2P17540 419 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CHRM3P20309 590 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 RPL10P27635 214 aaKnown RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CTGFP29279 349 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ACVRL1P37023 503 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 TBX4P57082 545 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 OR4D1Q15615 310 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 SLC14A2Q15849 920 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms