RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 F5H5T6 163 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 PRSS56P0CW18 603 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 SLC6A4P31645 630 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 YBEYP58557 167 aaPredicted RBP24.96■■□□□ 1.59
RAB40C-204ENST00000538492 MS4A2Q01362 244 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 SP3Q02447 781 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 GSTA3Q16772 222 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 OR52E8Q6IFG1 317 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 FUT10Q6P4F1 479 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 TAS1R1Q7RTX1 841 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 DBF4BQ8NFT6 615 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 OR7D4Q8NG98 312 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 MAP3K13O43283 966 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 SNUPNO95149 360 aaKnown RBP24.95■■□□□ 1.58
RAB40C-204ENST00000538492 WISP3O95389 354 aaPredicted RBP24.95■■□□□ 1.58
RAB40C-204ENST00000538492 TCN1P20061 433 aaPredicted RBP24.95■■□□□ 1.58
RAB40C-204ENST00000538492 MAPKAPK2P49137 400 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 MRPS22P82650 360 aaKnown RBP24.95■■□□□ 1.58
RAB40C-204ENST00000538492 RING1Q06587 406 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 FAM45BPQ6NSW5 357 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 PRSS55Q6UWB4 352 aaPredicted RBP24.95■■□□□ 1.58
RAB40C-204ENST00000538492 LRRC8DQ7L1W4 858 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 SLC22A9Q8IVM8 553 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 FAM45AQ8TCE6 357 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 FEM1CQ96JP0 617 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 CASD1Q96PB1 797 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 ENPP3O14638 875 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 IL31Q6EBC2 164 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 FAM156AQ8NDB6 213 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 PPP2R3CQ969Q6 453 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 MEAF6Q9HAF1 191 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 TRPC7Q9HCX4 862 aa24.95■■□□□ 1.58
RAB40C-204ENST00000538492 ATP6AP2A0A1C7CYW4 349 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 MOXD2PA6NHM9 499 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 KIF1CO43896 1103 aaKnown RBP24.94■■□□□ 1.58
RAB40C-204ENST00000538492 NBNO60934 754 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 ATP6AP2O75787 350 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 FGF1P05230 155 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 HLA-DPA1P20036 260 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 IMPDH1P20839 514 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 SATB1Q01826 763 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 RNF220Q5VTB9 566 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 AFAP1L2Q8N4X5 818 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 PHC3Q8NDX5 983 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 HMGCLL1Q8TB92 370 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 EXOC2Q96KP1 924 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 SPATA17Q96L03 361 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 NR1H4Q96RI1 486 aaPredicted RBP24.94■■□□□ 1.58
RAB40C-204ENST00000538492 SPON2Q9BUD6 331 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 VCX3BQ9H321 246 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 PDFQ9HBH1 243 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 TRAF6Q9Y4K3 522 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 CCDC189A1A4V9 331 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 LYNP07948 512 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 SERPINF2P08697 491 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 ATF6P18850 670 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 HDCP19113 662 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 CDH13P55290 713 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 GRAMD1BQ3KR37 738 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 FAR2Q96K12 515 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 CCDC167Q9P0B6 97 aa24.94■■□□□ 1.58
RAB40C-204ENST00000538492 UBDO15205 165 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 RNASEH1O60930 286 aaKnown RBP24.93■■□□□ 1.58
RAB40C-204ENST00000538492 TIAL1Q01085 375 aaKnown RBP eCLIP24.93■■□□□ 1.58
RAB40C-204ENST00000538492 ZNF678Q5SXM1 525 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 PCDH20Q8N6Y1 951 aaKnown RBP24.93■■□□□ 1.58
RAB40C-204ENST00000538492 BHLHE22Q8NFJ8 381 aaPredicted RBP24.93■■□□□ 1.58
RAB40C-204ENST00000538492 BRSK1Q8TDC3 778 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 ZFP37Q9Y6Q3 630 aaPredicted RBP24.93■■□□□ 1.58
RAB40C-204ENST00000538492 TET1Q8NFU7 2136 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 RPP40O75818 363 aaKnown RBP24.93■■□□□ 1.58
RAB40C-204ENST00000538492 FDXRP22570 491 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 ACVR1Q04771 509 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 MRNIPQ6NTE8 343 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 CHSY3Q70JA7 882 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 TUBGCP5Q96RT8 1024 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 NACA2Q9H009 215 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 VPS28Q9UK41 221 aa24.93■■□□□ 1.58
RAB40C-204ENST00000538492 SLC38A8A6NNN8 435 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 ALDH1A1P00352 501 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 ZDHHC11BP0C7U3 371 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 CD1DP15813 335 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 ME2P23368 584 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 HOXD9P28356 352 aaPredicted RBP24.92■■□□□ 1.58
RAB40C-204ENST00000538492 RPS24P62847 133 aaKnown RBP24.92■■□□□ 1.58
RAB40C-204ENST00000538492 OR4L1Q8NH43 312 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 MRPL1Q9BYD6 325 aaKnown RBP24.92■■□□□ 1.58
RAB40C-204ENST00000538492 CATSPERZQ9NTU4 200 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 POLR3BQ9NW08 1133 aaPredicted RBP24.92■■□□□ 1.58
RAB40C-204ENST00000538492 PSMD13Q9UNM6 376 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 RGRP47804 291 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 GNA12Q03113 381 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 AGKQ53H12 422 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 PQLC1Q8N2U9 271 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 NSMCE3Q96MG7 304 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 ZDHHC7Q9NXF8 308 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 ADA2Q9NZK5 511 aa24.92■■□□□ 1.58
RAB40C-204ENST00000538492 ADAM12O43184 909 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 GPC4O75487 556 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 SIX3O95343 332 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms