RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 HINFPQ9BQA5 517 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 MGME1Q9BQP7 344 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 MLPHQ9BV36 600 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PLA2G2FQ9BZM2 168 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 EPC1Q9H2F5 836 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ERVMER34-1Q9H9K5 563 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 GLOD4Q9HC38 313 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PCDH9Q9HC56 1237 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TCF7L2Q9NQB0 619 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 FAM114A2Q9NRY5 505 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SPASTQ9UBP0 616 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NUDT5Q9UKK9 219 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CORO1CQ9ULV4 474 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CCL26Q9Y258 94 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 UTP11Q9Y3A2 253 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PTPRSQ13332 1948 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CEP290O15078 2479 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PRRC2BQ5JSZ5 2229 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NUP210Q8TEM1 1887 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 UBA6A0AVT1 1052 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 HEATR9A2RTY3 570 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CTAGE15A4D2H0 777 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 M0QX08 132 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CHUKO15111 745 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 STX7O15400 261 aaKnown RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 GCATO75600 419 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PCDH8O95206 1070 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 SP9P0CG40 484 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CTAGE8P0CG41 777 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 SRCP12931 536 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 HNRNPA2B1P22626 353 aaKnown RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PSMA3P25788 255 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PHBP35232 272 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 P2RY2P41231 377 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CDKN2BP42772 138 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 KIR2DL1P43626 348 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PSMD8P48556 350 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 KPNA2P52292 529 aaKnown RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 COPAP53621 1224 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 LIMK1P53667 647 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 HNRNPKP61978 463 aaKnown RBP eCLIP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 E2F1Q01094 437 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CDH17Q12864 832 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 AGERQ15109 404 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 ALG1LQ6GMV1 187 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TTC23LQ6PF05 361 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 LVRNQ6Q4G3 990 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 RAD9BQ6WBX8 426 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CTAGE6Q86UF2 777 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CTAGE4Q8IX94 777 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CBARPQ8N350 705 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 ALLCQ8N6M5 410 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 MFSD2AQ8NA29 543 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 IL17RCQ8NAC3 791 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 ZBTB44Q8NCP5 570 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 OLIG1Q8TAK6 271 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 RMDN1Q96DB5 314 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 VPS50Q96JG6 964 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 IL12RB2Q99665 862 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CARD6Q9BX69 1037 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 GPR63Q9BZJ6 419 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 SMG9Q9H0W8 520 aaKnown RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TMEM245Q9H330 911 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 ZDHHC6Q9H6R6 413 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 LRRC19Q9H756 370 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 DOLKQ9UPQ8 538 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PCDHB9Q9Y5E1 797 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 HEY1Q9Y5J3 304 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 HEBP2Q9Y5Z4 205 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CSNK1G3Q9Y6M4 447 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3DA0A087WVF3 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3IA0A087WXS9 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3EA0A087X179 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3KA0A087X1G2 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3FA6NER0 549 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 METTL12A8MUP2 240 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3LB9A6J9 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 GREM1O60565 184 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 LILRB5O75023 590 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PHF2O75151 1096 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 RASGRP1O95267 797 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 FKBP9O95302 570 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 SLC4A1P02730 911 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3HP0C7X1 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 AMPD1P23109 780 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 HLA-FP30511 346 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 MLLT3P42568 568 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 DHPSP49366 369 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 AFF3P51826 1226 aaKnown RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 PHEXP78562 749 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 FOXK2Q01167 660 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 RPL6Q02878 288 aaKnown RBP3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CDK18Q07002 472 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 CBX3Q13185 183 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 ILKQ13418 452 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 LDLRAP1Q5SW96 308 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 SCARA3Q6AZY7 606 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TRIM68Q6AZZ1 485 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 TBC1D3GQ6DHY5 549 aa3.59□□□□□ -1.83
PTPN22-211ENST00000538253 NADSYN1Q6IA69 706 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms