RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 J3KR12 359 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 NR5A2O00482 541 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 B4GAT1O43505 415 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 PAGE1O75459 146 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 WISP3O95389 354 aaPredicted RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 POLR2IP36954 125 aaKnown RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 PNPLA4P41247 253 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 IREB2P48200 963 aaKnown RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 MAPK10P53779 464 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 ADAM17P78536 824 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 PMS2P3Q13401 168 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 PRPSAP1Q14558 356 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 POLD3Q15054 466 aaPredicted RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 INTS6LQ5JSJ4 861 aaKnown RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 HECTD2Q5U5R9 776 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 ZNF549Q6P9A3 640 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 TBPL2Q6SJ96 375 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 LINC00523Q86TU6 105 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 PHYKPLQ8IUZ5 450 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 ERI1Q8IV48 349 aaKnown RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 LZTR1Q8N653 840 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 ISOC1Q96CN7 298 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 DUS3LQ96G46 650 aaKnown RBP14.13□□□□□ -0.15
CLPB-209ENST00000538039 SLC52A3Q9NQ40 469 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 ARHGEF38Q9NXL2 777 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 RAD54BQ9Y620 910 aa14.13□□□□□ -0.15
CLPB-209ENST00000538039 MBLAC1A4D2B0 266 aaPredicted RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 FAM155AB1AL88 458 aaPredicted RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 H3BMM5 538 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 WNT3AP56704 352 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 DCTN2Q13561 401 aaKnown RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 SEMA3AQ14563 771 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 RABL3Q5HYI8 236 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 ZNF678Q5SXM1 525 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 KRT80Q6KB66 452 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 CLVS1Q8IUQ0 354 aaPredicted RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 ANKRD13AQ8IZ07 590 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 ZNF786Q8N393 782 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 ATPAF2Q8N5M1 289 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 ANKFN1Q8N957 763 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 SHCBP1Q8NEM2 672 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 PPHLN1Q8NEY8 458 aaKnown RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 TANKQ92844 425 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 C12orf43Q96C57 262 aaKnown RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 LTB4R2Q9NPC1 389 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 BTRCQ9Y297 605 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 A0A0J9YYE9 177 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 ASPDHA6ND91 283 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 MTSS1O43312 755 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 KPNA6O60684 536 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 GPC4O75487 556 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 MOCS2O96007 188 aaPredicted RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 SLC4A1P02730 911 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 BMP2P12643 396 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 CCNCP24863 283 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 DIO3P55073 304 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 POU4F1Q01851 419 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 TRAP1Q12931 704 aaKnown RBP14.12□□□□□ -0.15
CLPB-209ENST00000538039 ARL13BQ3SXY8 428 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 TIGD5Q53EQ6 642 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 KLC3Q6P597 504 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 ERMP1Q7Z2K6 904 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 LYSMD3Q7Z3D4 306 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 STON2Q8WXE9 905 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 CASP10Q92851 521 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 MYLPFQ96A32 169 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 PIF1Q9H611 641 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 TIMMDC1Q9NPL8 285 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 PNPLA3Q9NST1 481 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 OAZ3Q9UMX2 235 aa14.12□□□□□ -0.15
CLPB-209ENST00000538039 MATN3O15232 486 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 CDK14O94921 469 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 MMP2P08253 660 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 LTA4HP09960 611 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 BEX3Q00994 111 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 FAM45BPQ6NSW5 357 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 KDELC1Q6UW63 502 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 RYBPQ8N488 228 aaPredicted RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 OR2T34Q8NGX1 318 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 OR2T3Q8NH03 318 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 FAM45AQ8TCE6 357 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 SGCDQ92629 289 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 VPS33AQ96AX1 596 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 FSD1LQ9BXM9 530 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 OSER1Q9NX31 292 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 AAR2Q9Y312 384 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 A0A087X1B8 175 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 VARSP26640 1264 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 PRDX3P30048 256 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 AIF1P55008 147 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 OR4D1Q15615 310 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 TWF2Q6IBS0 349 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 SLC16A10Q8TF71 515 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 DCPSQ96C86 337 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 C19orf60Q96EN9 201 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 MAML3Q96JK9 1138 aa14.11□□□□□ -0.15
CLPB-209ENST00000538039 FCRL2Q96LA5 508 aaPredicted RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 CLK4Q9HAZ1 481 aaKnown RBP14.11□□□□□ -0.15
CLPB-209ENST00000538039 NSMCE4AQ9NXX6 385 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms