RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 TEX33O43247 280 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 RAMP2O60895 175 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 STK17BO94768 372 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 ELAVL4P26378 380 aaKnown RBP11.18□□□□□ -0.62
CLPB-208ENST00000538021 AK4P27144 223 aaPredicted RBP11.18□□□□□ -0.62
CLPB-208ENST00000538021 MAN1A1P33908 653 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 ILF3Q12906 894 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLPB-208ENST00000538021 PKP1Q13835 747 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 ERV3-1Q14264 604 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 UGP2Q16851 508 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
CLPB-208ENST00000538021 TMEM71Q6P5X7 295 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 GJB7Q6PEY0 223 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 SLC30A9Q6PML9 568 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 CEACAM20Q6UY09 585 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 ZDHHC17Q8IUH5 632 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 BMPERQ8N8U9 685 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 NT5C3BQ969T7 300 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 AHCYL2Q96HN2 611 aaKnown RBP11.18□□□□□ -0.62
CLPB-208ENST00000538021 CEP63Q96MT8 703 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 LGR4Q9BXB1 951 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 SPRY4Q9C004 299 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 GOLPH3LQ9H4A5 285 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 ESPL1Q14674 2120 aa11.18□□□□□ -0.62
CLPB-208ENST00000538021 MED13Q9UHV7 2174 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 BECN2A8MW95 431 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 KDELR3O43731 214 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 RFPL1O75677 317 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 RECQL5O94762 991 aaPredicted RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 DDAH2O95865 285 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 RHOQP17081 205 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 KRT9P35527 623 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 STAT1P42224 750 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 MAPKAPK2P49137 400 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 MC2RQ01718 297 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 AGERQ15109 404 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 EIF2S3LQ2VIR3 472 aaKnown RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 CRTC2Q53ET0 693 aaPredicted RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 COBLL1Q53SF7 1204 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 FAM102AQ5T9C2 384 aaPredicted RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 ENOSF1Q7L5Y1 443 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 ZNF761Q86XN6 746 aaPredicted RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 NRROSQ86YC3 692 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 TICAM1Q8IUC6 712 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 RNF31Q96EP0 1072 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 DPYSL5Q9BPU6 564 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 TRIT1Q9H3H1 467 aaKnown RBP11.17□□□□□ -0.62
CLPB-208ENST00000538021 SUV39H2Q9H5I1 410 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 WDR26Q9H7D7 661 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 APMAPQ9HDC9 416 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 PLCB1Q9NQ66 1216 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 OR12D3Q9UGF7 316 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 TLK1Q9UKI8 766 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 ATP8A1Q9Y2Q0 1164 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 MFHAS1Q9Y4C4 1052 aa11.17□□□□□ -0.62
CLPB-208ENST00000538021 C2CD3Q4AC94 2353 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
CLPB-208ENST00000538021 PSMA7O14818 248 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 CLDN1O95832 211 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 PDGFAP04085 211 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 HSP90AA1P07900 732 aaKnown RBP11.16□□□□□ -0.62
CLPB-208ENST00000538021 HOXC4P09017 264 aaPredicted RBP11.16□□□□□ -0.62
CLPB-208ENST00000538021 BMP6P22004 513 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 F8A1P23610 371 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 FLT3P36888 993 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 DLSTP36957 453 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 MMP12P39900 470 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 STAT5AP42229 794 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 GNPDA1P46926 289 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 PTK2Q05397 1052 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 PHLDB2Q86SQ0 1253 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 NLRP14Q86W24 1093 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 NAGSQ8N159 534 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 ESX1Q8N693 406 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 HCAR2Q8TDS4 363 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 CFAP57Q96MR6 1250 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 ZPBPQ9BS86 351 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 TMEM51Q9NW97 253 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 TMEM248Q9NWD8 314 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 POLHQ9Y253 713 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 TMEM184BQ9Y519 407 aaPredicted RBP11.16□□□□□ -0.62
CLPB-208ENST00000538021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLPB-208ENST00000538021 RPS6KL1Q9Y6S9 549 aa11.16□□□□□ -0.62
CLPB-208ENST00000538021 TRBV23OR9-2A0A075B6M9 112 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 CDC14CA4D256 554 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 GOLGA8SH3BPF8 625 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 POLR1CO15160 346 aaPredicted RBP11.15□□□□□ -0.62
CLPB-208ENST00000538021 INPP4BO15327 924 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 KATNA1O75449 491 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 FURINP09958 794 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 ELFN1P0C7U0 828 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 TRIM23P36406 574 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 KRT85P78386 507 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 GPLD1P80108 840 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 ATP11AP98196 1134 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms