RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDB1-209ENST00000537877 THOC5Q13769 683 aaKnown RBP12.38□□□□□ -0.43
DDB1-209ENST00000537877 TMED2Q15363 201 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 ZNF805Q5CZA5 627 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 TRMT11Q7Z4G4 463 aaKnown RBP12.38□□□□□ -0.43
DDB1-209ENST00000537877 ZSWIM9Q86XI8 627 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 CHPFQ8IZ52 775 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 UNC5BQ8IZJ1 945 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 MAFAQ8NHW3 353 aaPredicted RBP12.38□□□□□ -0.43
DDB1-209ENST00000537877 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 TLCD1Q96CP7 247 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 PPP1R16AQ96I34 528 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 DNAJC1Q96KC8 554 aaKnown RBP12.38□□□□□ -0.43
DDB1-209ENST00000537877 CPNE1Q99829 537 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 GPR63Q9BZJ6 419 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 MFSD1Q9H3U5 465 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
DDB1-209ENST00000537877 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 OGFRQ9NZT2 677 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDB1-209ENST00000537877 TXNDC16Q9P2K2 825 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 CTNNAL1Q9UBT7 734 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 HCN2Q9UL51 889 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 STON1Q9Y6Q2 735 aa12.38□□□□□ -0.43
DDB1-209ENST00000537877 CKAP5Q14008 2032 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ZNF106Q9H2Y7 1883 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 UPK3BL1B0FP48 263 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 UPK3BL2E5RIL1 263 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 C1QTNF3-AMACRE9PGA6 284 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 H7C0S8 307 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 STX7O15400 261 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 KRT37O76014 449 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 KRT38O76015 456 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ALPIP09923 528 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 CYP2A6P11509 494 aaPredicted RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 CTPS1P17812 591 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ITGB7P26010 798 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 HNF1BP35680 557 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 HMGCLP35914 325 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 GP5P40197 560 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ABL2P42684 1182 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 SUOXP51687 545 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 CSE1LP55060 971 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 ILF2Q12905 390 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 CAMK2GQ13555 558 aaPredicted RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 PON2Q15165 354 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 UGP2Q16851 508 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 FBXO43Q4G163 708 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 HSP90AA5PQ58FG0 334 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 TEDDM1Q5T9Z0 273 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 FSTL4Q6MZW2 842 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 AFTPHQ6ULP2 937 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 PACS1Q6VY07 963 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 OR13C4Q8NGS5 318 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 PIP4K2CQ8TBX8 421 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 SCG3Q8WXD2 468 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 MRRFQ96E11 262 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ACOX2Q99424 681 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 SENP1Q9P0U3 644 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 DUSP12Q9UNI6 340 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
DDB1-209ENST00000537877 PKP3Q9Y446 797 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 KCTD3Q9Y597 815 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 ACTL7BQ9Y614 415 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 SCN8AQ9UQD0 1980 aa12.37□□□□□ -0.43
DDB1-209ENST00000537877 C1orf232A0A0U1RR37 186 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 KPNA3O00505 521 aaPredicted RBP12.36□□□□□ -0.43
DDB1-209ENST00000537877 AURKAO14965 403 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 NARSO43776 548 aaKnown RBP12.36□□□□□ -0.43
DDB1-209ENST00000537877 PIAS1O75925 651 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 EGFP01133 1207 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 SNRPAP09012 282 aaKnown RBP12.36□□□□□ -0.43
DDB1-209ENST00000537877 ZNF30P17039 623 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 XPAP23025 273 aaPredicted RBP12.36□□□□□ -0.43
DDB1-209ENST00000537877 NTSR1P30989 418 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 ARSDP51689 593 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 MRPS21P82921 87 aaKnown RBP12.36□□□□□ -0.43
DDB1-209ENST00000537877 TFF2Q03403 129 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 HSF5Q4G112 596 aaPredicted RBP12.36□□□□□ -0.43
DDB1-209ENST00000537877 GRTP1Q5TC63 336 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 EMC10Q5UCC4 262 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 FAM46CQ5VWP2 391 aa12.36□□□□□ -0.43
DDB1-209ENST00000537877 SDE2Q6IQ49 451 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms