RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 LRRC74BQ6ZQY2 392 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ISCA2Q86U28 154 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 RP9Q8TA86 221 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SHKBP1Q8TBC3 707 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SH3RF2Q8TEC5 729 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 TDRD1Q9BXT4 1180 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 NUF2Q9BZD4 464 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 GSTO2Q9H4Y5 243 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 MEAF6Q9HAF1 191 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ACSS2Q9NR19 701 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 NMRK1Q9NWW6 199 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SAGE1Q9NXZ1 904 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ARHGAP26Q9UNA1 814 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SSX2IPQ9Y2D8 614 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ACTL7AQ9Y615 435 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CCL22O00626 93 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 GLP2RO95838 553 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 HSPA1AP0DMV8 641 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 HSPA1BP0DMV9 641 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 EPHA3P29320 983 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CORO1AP31146 461 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 MXRA7P84157 204 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ADGRF1Q5T601 910 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 C6orf163Q5TEZ5 329 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 MRNIPQ6NTE8 343 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 DENND1CQ8IV53 801 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF689Q96CS4 500 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 NAF1Q96HR8 494 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF512Q96ME7 567 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 LENG8Q96PV6 779 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 TRMOQ9BU70 441 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CINPQ9BW66 212 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 AGO1Q9UL18 857 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 YIPF1Q9Y548 306 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SPO11Q9Y5K1 396 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 RGSL1A5PLK6 1076 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 NEMP2A6NFY4 417 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 LIN7AO14910 233 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 INSIG1O15503 277 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 PQBP1O60828 265 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 FKBP6O75344 327 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CD160O95971 181 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 THRAP10827 490 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CD1DP15813 335 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 MNX1P50219 401 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 MTTPP55157 894 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TAF11Q15544 211 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TAF1AQ15573 450 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TMEM150AQ86TG1 271 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 KIRREL3Q8IZU9 778 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 OR13C4Q8NGS5 318 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 OR6P1Q8NGX9 317 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 OR4L1Q8NH43 312 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 AGR3Q8TD06 166 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TOX2Q96NM4 488 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 YY1AP1Q9H869 796 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 ZBTB26Q9HCK0 441 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TRPM5Q9NZQ8 1165 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 PTPRSQ13332 1948 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 GOLGA8QA0A0J9YX86 632 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 GOLGA8OA6NCC3 632 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 VGLL3A8MV65 326 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 GOLGA8NF8WBI6 632 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 GREM1O60565 184 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 ZMPSTE24O75844 475 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 IMPDH1P20839 514 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 C1orf146Q5VVC0 180 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 LDB1Q86U70 411 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 PIM3Q86V86 326 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 FAM217AQ8IXS0 508 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 SLC39A11Q8N1S5 342 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 RHEBL1Q8TAI7 183 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 BLOC1S5Q8TDH9 187 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 JADE3Q92613 823 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 WBP2Q969T9 261 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 PTERQ96BW5 349 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 AARSD1Q9BTE6 412 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 RNF38Q9H0F5 515 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 SUDS3Q9H7L9 328 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 EML4Q9HC35 981 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TNFRSF12AQ9NP84 129 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 ANGPTL2Q9UKU9 493 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 PRPF19Q9UMS4 504 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 MED16Q9Y2X0 877 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 WASF2Q9Y6W5 498 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 TMEM233B4DJY2 109 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 NVLO15381 856 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CRTAMO95727 393 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 OLFM2O95897 454 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 RPSAP08865 295 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 ANPEPP15144 967 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CD1EP15812 388 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF37AP17032 561 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CD9P21926 228 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 KCNC1P48547 511 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 RAB33AQ14088 237 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CCNIQ14094 377 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms