RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 HOXC4P09017 264 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TYRO3Q06418 890 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 LBRQ14739 615 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TAF8Q7Z7C8 310 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 B3GNT8Q7Z7M8 397 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZNF605Q86T29 641 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FBXO39Q8N4B4 442 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 GPR156Q8NFN8 814 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZNF599Q96NL3 588 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 LRRN3Q9H3W5 708 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZWILCHQ9H900 591 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FGF22Q9HCT0 170 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CWC15Q9P013 229 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SCINQ9Y6U3 715 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ARHGEF17Q96PE2 2063 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 A8MX80 341 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TNFRSF10CO14798 259 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 LRCH4O75427 683 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TRIM23P36406 574 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 INHBCP55103 352 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SLC10A7Q0GE19 358 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 DPYSQ14117 519 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ACOX1Q15067 660 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FILIP1LQ4L180 1135 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TMCO4Q5TGY1 634 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 RAB11FIP2Q7L804 512 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZNF571Q7Z3V5 609 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FAM46DQ8NEK8 389 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZNF653Q96CK0 615 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TMEM74Q96NL1 305 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FOXP3Q9BZS1 431 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 WDR26Q9H7D7 661 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 MRPL40Q9NQ50 206 aaKnown RBP19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 AIPL1Q9NZN9 384 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 MYO18BQ8IUG5 2567 aa19.74■□□□□ 0.75
TNFRSF1B-204ENST00000536782 K7ENP7 123 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PDE2AO00408 941 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 GLB1P16278 677 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 GM2AP17900 193 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CCKBRP32239 447 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 UGT1A5P35504 534 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PRKCIP41743 596 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CLN3Q13286 438 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZNF235Q14590 738 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ANO6Q4KMQ2 910 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PNCKQ6P2M8 343 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 INO80CQ6PI98 192 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 OGFOD3Q6PK18 319 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CCDC81Q6ZN84 652 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CCNJLQ8IV13 435 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TP53INP2Q8IXH6 220 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TRIM11Q96F44 468 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 NSMCE3Q96MG7 304 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TMEM168Q9H0V1 697 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 MRPL47Q9HD33 250 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 MYO1AQ9UBC5 1043 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 B4GALT6Q9UBX8 382 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 MOSPD1Q9UJG1 213 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 APPL1Q9UKG1 709 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PCDHGA7Q9Y5G6 932 aa19.73■□□□□ 0.75
TNFRSF1B-204ENST00000536782 A0A1W2PQ67 120 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SMTNL1A8MU46 457 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 H3BRJ5 948 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 DDX3XO00571 662 aaKnown RBP eCLIP19.72■□□□□ 0.757e-14■■■■□ 22.4
TNFRSF1B-204ENST00000536782 MYBL1P10243 752 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PLA2G2AP14555 144 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PNLIPP16233 465 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SLC5A2P31639 672 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PCK1P35558 622 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 HSPA9P38646 679 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ARL4AP40617 200 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 KLHL30Q0D2K2 578 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TSR1Q2NL82 804 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ZSCAN23Q3MJ62 389 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 C14orf28Q4W4Y0 310 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CERCAMQ5T4B2 595 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 Q8N9G6 341 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SPOCK2Q92563 424 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TTC9Q92623 222 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 BPIFA3Q9BQP9 254 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 LGR4Q9BXB1 951 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 DPEP2Q9H4A9 486 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CYP4F12Q9HCS2 524 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PCDHGC4Q9Y5F7 938 aa19.72■□□□□ 0.75
TNFRSF1B-204ENST00000536782 BOD1L1Q8NFC6 3051 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 A0A1W2PQC6 194 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TTC24A2A3L6 582 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 B4DGG1 531 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 NOBOXO60393 691 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SOCS5O75159 536 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 JMJD7P0C870 316 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 NFKBIAP25963 317 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ARHGEF7Q14155 803 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 DPYSL2Q16555 572 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 BOLA3Q53S33 107 aa19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 E4F1Q66K89 784 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TMCO3Q6UWJ1 677 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms