RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MLPHQ9BV36 600 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAGEH1Q9H213 219 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF395Q9H8N7 513 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LRRC40Q9H9A6 602 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GDE1Q9NZC3 331 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 VPS28Q9UK41 221 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PLA2G4CQ9UP65 541 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ENO4A6NNW6 628 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 B2RBV5 119 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PENKP01210 267 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PROCP04070 461 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SERPINE1P05121 402 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TYRP14679 529 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 AOC1P19801 751 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 OXCT1P55809 520 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CRADDP78560 199 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ARF5P84085 180 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MESP2Q0VG99 397 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TUBB3Q13509 450 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LBRQ14739 615 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 EML3Q32P44 896 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 KCTD11Q693B1 232 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PARM1Q6UWI2 310 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 C12orf40Q86WS4 652 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ADGRG2Q8IZP9 1017 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 BPIFB1Q8TDL5 484 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 IRF7Q92985 503 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ALG14Q96F25 216 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CERS2Q96G23 380 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 EXOC2Q96KP1 924 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TEKT5Q96M29 485 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FEM1AQ9BSK4 669 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 RPP25Q9BUL9 199 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GBA3Q9H227 469 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NT5MQ9NPB1 228 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CASS4Q9NQ75 786 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ARMCX1Q9P291 453 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 OR51B4Q9Y5P0 310 aa13.02□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAGEB16A2A368 324 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DPPA5A6NC42 116 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SPECC1L-ADORA2AF8WAN1 911 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 USP12O75317 370 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 USP1O94782 785 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TOP3BO95985 862 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MT-CYBP00156 380 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FESP07332 822 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KCNA5P22460 613 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 WEE1P30291 646 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PGM1P36871 562 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SLC1A6P48664 564 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IL10RBQ08334 325 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IHHQ14623 411 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PCLAFQ15004 111 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FUT11Q495W5 492 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DNAL1Q4LDG9 190 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TIGD7Q6NT04 549 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RNF135Q8IUD6 432 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KLHDC8BQ8IXV7 354 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RIPOR3Q96MK2 946 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FCRL3Q96P31 734 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ACE2Q9BYF1 805 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RBM22Q9NW64 420 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 STX18Q9P2W9 335 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 VPS51Q9UID3 782 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TRHDEQ9UKU6 1024 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PSAT1Q9Y617 370 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MUC22E2RYF6 1773 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GRXCR2A6NFK2 248 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TM7SF2O76062 418 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PSMG1O95456 288 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CD160O95971 181 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MT-CO1P00395 513 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CYBBP04839 570 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RGRP47804 291 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZNF33AQ06730 810 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DHCR24Q15392 516 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CCDC153Q494R4 210 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 C16orf46Q6P387 395 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NET1Q7Z628 596 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RBM15BQ8NDT2 890 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZNF778Q96MU6 729 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 VAT1Q99536 393 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RBBP8Q99708 897 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DNAJC28Q9NX36 388 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TBC1D14Q9P2M4 693 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 COPG2Q9UBF2 871 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms