RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 NEMP1O14524 444 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 CD48P09326 243 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 SERPINA4P29622 427 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 SLC1A1P43005 524 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 UCNP55089 124 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 YPEL5P62699 121 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 POLR2LP62875 67 aaKnown RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 EIF2B5Q13144 721 aaKnown RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 C1orf61Q13536 156 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 ANKRD20A8PQ5CZ79 823 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 RBFAQ8N0V3 343 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 CBARPQ8N350 705 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 MAML1Q92585 1016 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 ATXN7L3BQ96GX2 97 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 NSMCE3Q96MG7 304 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 IL12RB2Q99665 862 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 RBSNQ9H1K0 784 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 TCEAL2Q9H3H9 227 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 THSD1Q9NS62 852 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 ENTPD2Q9Y5L3 495 aa12.52□□□□□ -0.41
PRKDC-207ENST00000536483 ASH1LQ9NR48 2969 aaKnown RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 TPP1O14773 563 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 CASC3O15234 703 aaKnown RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 LZTS3O60299 673 aaPredicted RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 SOCS5O75159 536 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 TM7SF2O76062 418 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PIGNO95427 931 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 CES1P23141 567 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 KDELR1P24390 212 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 CCNCP24863 283 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 RBMS1P29558 406 aaKnown RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 MMP12P39900 470 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 ZNF75DP51815 510 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 RHDQ02161 417 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 BCL2L1Q07817 233 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 KRT81Q14533 505 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 NR0B2Q15466 257 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PERM1Q5SV97 790 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 NCBP2-AS2Q69YL0 99 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 ZSWIM9Q86XI8 627 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 GAS2L3Q86XJ1 694 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 CPNE8Q86YQ8 564 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PQLC3Q8N755 202 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 KCTD6Q8NC69 237 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 EXOC2Q96KP1 924 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 TBATAQ96M53 351 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 SLC46A1Q96NT5 459 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PANX2Q96RD6 677 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 DPH1Q9BZG8 443 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PCDH12Q9NPG4 1184 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 SPTLC3Q9NUV7 552 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 NCKIPSDQ9NZQ3 722 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 SPASTQ9UBP0 616 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
PRKDC-207ENST00000536483 ATP8A1Q9Y2Q0 1164 aa12.51□□□□□ -0.41
PRKDC-207ENST00000536483 A0A0A6YYK5 440 aaPredicted RBP12.5□□□□□ -0.41
PRKDC-207ENST00000536483 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 MATN3O15232 486 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 GCATO75600 419 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 MX2P20592 715 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 PEX5P50542 639 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 THOP1P52888 689 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 TAZQ16635 292 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 IFI16Q16666 785 aaKnown RBP12.5□□□□□ -0.41
PRKDC-207ENST00000536483 PRRT3Q5FWE3 981 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 LRRC73Q5JTD7 316 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 MARC1Q5VT66 337 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 SLC9A4Q6AI14 798 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 IGF2-ASQ6U949 168 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 RBM44Q6ZP01 1051 aaKnown RBP12.5□□□□□ -0.41
PRKDC-207ENST00000536483 PHACTR4Q8IZ21 702 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 ATPAF2Q8N5M1 289 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 TP53I13Q8NBR0 393 aaPredicted RBP12.5□□□□□ -0.41
PRKDC-207ENST00000536483 TPCN2Q8NHX9 752 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 CXorf40AQ8TE69 158 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 BTN2A2Q8WVV5 523 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 RAPGEF5Q92565 580 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 WBP1Q96G27 269 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
PRKDC-207ENST00000536483 RNF157Q96PX1 679 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 SEMA4CQ9C0C4 833 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 APOBEC3BQ9UH17 382 aaKnown RBP12.5□□□□□ -0.41
PRKDC-207ENST00000536483 RP1P56715 2156 aa12.5□□□□□ -0.41
PRKDC-207ENST00000536483 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms