RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SH3BP5O60239 455 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 FZD6O60353 706 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ANXA9O76027 345 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 MMP2P08253 660 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 GOLGA6DP0CG33 693 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 NFKB1P19838 968 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 CD68P34810 354 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-205ENST00000536255 MMP12P39900 470 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 CCT8P50990 548 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 SKOR1P84550 965 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 MPP3Q13368 585 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 FGL2Q14314 439 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 PRPSAP1Q14558 356 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 TMEM52BQ4KMG9 183 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 CCDC70Q6NSX1 233 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 DRICH1Q6PGQ1 229 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ZSWIM9Q86XI8 627 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 FAM71DQ8N9W8 422 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ACTRT1Q8TDG2 376 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ATG4AQ8WYN0 398 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 LRRC45Q96CN5 670 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 IFT43Q96FT9 208 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 NSMCE3Q96MG7 304 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 WDR24Q96S15 920 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ELF4Q99607 663 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-205ENST00000536255 TMEM121Q9BTD3 319 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 C1QTNF7Q9BXJ2 289 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 C1QTNF2Q9BXJ5 285 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 GBA3Q9H227 469 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 C10orf88Q9H8K7 445 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 GOLGA6AQ9NYA3 693 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 ZNF148Q9UQR1 794 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 CHKBQ9Y259 395 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 CNOT1A5YKK6 2376 aaKnown RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 GOLGA6L10A0A0M3HER8 536 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 A0A1B0GTQ1 180 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 PCDHGA12O60330 932 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 TM7SF2O76062 418 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 PAK4O96013 591 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 ITGAVP06756 1048 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 ADRB1P08588 477 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 GEMP55040 296 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 CDK18Q07002 472 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 ARHGEF7Q14155 803 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 OASLQ15646 514 aaKnown RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 P3H1Q32P28 736 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 N4BP2L1Q5TBK1 243 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 PAPD7Q5XG87 772 aaKnown RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 GCNT7Q6ZNI0 430 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 DPPA4Q7L190 304 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 SPATS2Q86XZ4 545 aaKnown RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 CCDC89Q8N998 374 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 CCDC110Q8TBZ0 833 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 PIH1D2Q8WWB5 315 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 ASB12Q8WXK4 309 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 TADA1Q96BN2 335 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 SCRN2Q96FV2 425 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 CAMK1GQ96NX5 476 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 ERVMER34-1Q9H9K5 563 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 DRG1Q9Y295 367 aaKnown RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
RPAIN-205ENST00000536255 PPIL1Q9Y3C6 166 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 SAR1BQ9Y6B6 198 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 NCOR2Q9Y618 2525 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 SPTBN2O15020 2390 aa13.58□□□□□ -0.24
RPAIN-205ENST00000536255 A0A0J9YYE9 177 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 A6NNZ2 444 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 RAD51BO15315 384 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 YKT6O15498 198 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 FLRT2O43155 660 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 MMP20O60882 483 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 PMPCBO75439 489 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 GCATO75600 419 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 MT-CYBP00156 380 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-205ENST00000536255 EPOP01588 193 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 TRBC1P01850 177 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 PDHA1P08559 390 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 ELFN1P0C7U0 828 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 THEGLP0DJG4 465 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 ITIH2P19823 946 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 VIPR1P32241 457 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-205ENST00000536255 CLDN2P57739 230 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 IL9RQ01113 521 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 SNX1Q13596 522 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 SUZ12Q15022 739 aaKnown RBP13.57□□□□□ -0.24
RPAIN-205ENST00000536255 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-205ENST00000536255 PCSK7Q16549 785 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 DBX2Q6ZNG2 339 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 ABI3BPQ7Z7G0 1075 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 OXR1Q8N573 874 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 DENND6BQ8NEG7 585 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 LPCAT1Q8NF37 534 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 OR13H1Q8NG92 308 aa13.57□□□□□ -0.24
RPAIN-205ENST00000536255 SPATA22Q8NHS9 363 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms