RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 LIG3P49916 1009 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 CDH6P55285 790 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 PPARDQ03181 441 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 SLC10A7Q0GE19 358 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 TRIM14Q14142 442 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 NFATC4Q14934 902 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 HADHQ16836 314 aaKnown RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 SMTNL2Q2TAL5 461 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 ASTE1Q2TB18 679 aaPredicted RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 CCDC122Q5T0U0 273 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 CFAP58Q5T655 872 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 TXNRD3NBQ6F5E7 133 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 LIPIQ6XZB0 460 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 TP53INP2Q8IXH6 220 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 CBARPQ8N350 705 aaPredicted RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 BBS5Q8N3I7 341 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 FSTL5Q8N475 847 aaPredicted RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 TEX26Q8N6G2 289 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 NSMCE3Q96MG7 304 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 NUDCD1Q96RS6 583 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 IL12RB2Q99665 862 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 WRAP53Q9BUR4 548 aaKnown RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 APOOQ9BUR5 198 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 LRRC61Q9BV99 259 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 SLC13A1Q9BZW2 595 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 APOBEC3BQ9UH17 382 aaKnown RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 PNMA8BQ9ULN7 279 aaPredicted RBP10.85□□□□□ -0.67
CCDC60-202ENST00000535685 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 PPIL1Q9Y3C6 166 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 DGKBQ9Y6T7 804 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 BPTFQ12830 3046 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 TNFRSF10CO14798 259 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 GCATO75600 419 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 NEBLO76041 1014 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 RASGRP1O95267 797 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 H2AFZP0C0S5 128 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 GM2AP17900 193 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 NFKBIAP25963 317 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 HTR1BP28222 390 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 TEAD1P28347 426 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 CASP14P31944 242 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 MAN1A1P33908 653 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 RPIAP49247 311 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 SCNN1BP51168 640 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 HK3P52790 923 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 KIAA1024LP59773 190 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 PAFAH1B3Q15102 231 aaKnown RBP10.84□□□□□ -0.67
CCDC60-202ENST00000535685 PDK2Q15119 407 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 ELOCQ15369 112 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 PRRT3Q5FWE3 981 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 ALG1LQ6GMV1 187 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 IGF2-ASQ6U949 168 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 H2AFVQ71UI9 128 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 OR8K1Q8NGG5 319 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
CCDC60-202ENST00000535685 WDR48Q8TAF3 677 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 ZNF564Q8TBZ8 553 aaPredicted RBP10.84□□□□□ -0.67
CCDC60-202ENST00000535685 LMX1AQ8TE12 382 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 CPLX3Q8WVH0 158 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 HSPH1Q92598 858 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 NAT6Q93015 286 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 FAF2Q96CS3 445 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 TSGA13Q96PP4 275 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
CCDC60-202ENST00000535685 CLPBQ9H078 707 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 CAAP1Q9H8G2 361 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 AMACRQ9UHK6 382 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 COQ6Q9Y2Z9 468 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 ZFHX4Q86UP3 3567 aa10.84□□□□□ -0.67
CCDC60-202ENST00000535685 ZNF487B1APH4 448 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 PSMD11O00231 422 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 YY2O15391 372 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 CBFA2T2O43439 604 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 TCEA3O75764 348 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 RECQL5O94762 991 aaPredicted RBP10.83□□□□□ -0.68
CCDC60-202ENST00000535685 PROSCO94903 275 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 ANXA6P08133 673 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 ALPIP09923 528 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 TSHRP16473 764 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 CES1P23141 567 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 CLDN6P56747 220 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 GALNT2Q10471 571 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 ZNF235Q14590 738 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 INPP5AQ14642 412 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 NR0B2Q15466 257 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 NFKBIBQ15653 356 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 ALG11Q2TAA5 492 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 DEFB133Q30KQ1 61 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 FAXCQ5TGI0 409 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 MARC1Q5VT66 337 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 SPECC1LQ69YQ0 1117 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 ESRP1Q6NXG1 681 aaKnown RBP10.83□□□□□ -0.68
CCDC60-202ENST00000535685 KDM7AQ6ZMT4 941 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 VSIG1Q86XK7 387 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 RAVER1Q8IY67 606 aaKnown RBP10.83□□□□□ -0.68
CCDC60-202ENST00000535685 RBFAQ8N0V3 343 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms